Conserved Protein Domain Family
CoV_E

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pfam02723: CoV_E 
Coronavirus small envelope protein E
This family includes E proteins, well conserved among Coronavirus strains. They are small, integral membrane proteins involved in several aspects of the virus' life cycle, such as assembly, budding, envelope formation, and pathogenesis. They act as a viroporin by oligomerizing after insertion in host membranes to create a hydrophilic pore that allows ion transport,. SARS-CoV E protein forms a Ca2+ permeable channel in the endoplasmic reticulum Golgi apparatus intermediate compartment (ERGIC)/Golgi membranes. The E protein ion channel activity alters Ca2+ homeostasis within cells boosting the activation of the NLRP3 inflammasome, leading to the overproduction of IL-beta. SARS-CoV overstimulates the NF-kappaB inflammatory pathway, triggering p38 MARK activation.
Statistics
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PSSM-Id: 460662
Aligned: 21 rows
Threshold Bit Score: 58.0231
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q66193    2 FNLFLTDTVwYVGQIIFIFAVCLMVTIIVVAFLASIKLCIQLCGLCNTLVLSPSIYLYDrskqLYKYYN-EEMRLPlleV 80  Murine hepatitis virus
AGT21335  1 MLQLVDDHG-LLVNGILWLILLFFVLIVSITFIQLINLCFTCHRFCSRAVYTPVGRMYG----VYKSYM-QIEPLP---I 71 
Q0Q464    1 MLQLVNDNG-VVVNAILWLFVLFFVLVISITFVQLINLCFTCHRLCNNVVYKPVGKVYG----VYKSYM-RIQPLTs-dI 73  Scotophilus bat coro...
AJA91210  2 VELSLTDTVwYVGQIILIVAICLLVILIVVAALATFKLCIQLCGMCNTLVVSPSIYVYNrgrqFYKFYS-DAKP-PvldL 79 
BAS18868  4 ADFYLADTVwYVGQIIFIVAICLLVIIVVVAFLATFKLCIQLCGMCNTLVLSPSIYVFNrgrqFYELYN-QVKP-PvlnV 81 
A3EXD5    2 LPFVQEQIGaFIVNFFILSVVCAVTLVVCLAILTAIRLCVQCVSGCHTLVFLPAVHIYNtgraAYVKFQeSHPPYPp--E 79  Pipistrellus bat cor...
A3EX99    2 LPFVHEQIGtIIVNFFILTVVCAITLVVCLAILTAIRLCVQCASGVNTLLFVPAFYIYNtgrnAYFKFQeNRPPFPp--E 79  Tylonycteris bat cor...
AHY61342  2 LPFVQEQIGsFIVNFFIFTVACAIILLVCMAFLTATRLCVQCAIGLNALLVQPAIYVYNtgrsVYVKFQeSKPPLPp--D 79 
AGX27805  2 LPFVHQQLGsFIVNFFIFTVACAVILLVSMAILTACRLCVQCLTGVNTLLVQPAIYVYNmghsVYVKYQnSKPELPp--A 79 
AKZ19078  2 YSFVSEETGtLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPTVYVYS----RVKNLN-SSEGVP---D 73 
Q66193   81 DDI 83  Murine hepatitis virus
AGT21335 72 IDV 74 
Q0Q464   74 IQV 76  Scotophilus bat coronavirus 512
AJA91210 80 DDV 82 
BAS18868 82 DDV 84 
A3EXD5   80 DWV 82  Pipistrellus bat coronavirus HKU5
A3EX99   80 DWV 82  Tylonycteris bat coronavirus HKU4
AHY61342 80 EWV 82 
AGX27805 80 DWF 82 
AKZ19078 74 LLV 76 
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