6CYA,2GU0


Conserved Protein Domain Family
Rota_NS35

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pfam02509: Rota_NS35 
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Rotavirus non-structural protein 35
Rotavirus non-structural protein 35 (NS35) is a basic protein which possesses RNA-binding activity and is essential for genome replication.
Statistics
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PSSM-Id: 396869
Aligned: 2 rows
Threshold Bit Score: 569.655
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6CYA_A   1 MAELACFCYPHLENDSYKFIPFNNLAIKAMLTAKVDKKDMDKFYDSIIYGIAPPPQFKKRYNTNDnSRGMNFETIMFTKV 80  Rotavirus A
2GU0_B   1 MAELACFVSFSLTEDKVVWYPINKKAVQTMLCAKVEKDQRSNYYDTILYGVAPPPEFRNRFKTNE-RYGLDYESDQYTEL 79  Rotavirus C
6CYA_A  81 AMLICEALNSLKV-TQANVSNVLSRVVSIRHLENLVIRKENPQDILFHSKDLLLKSTLIAIGQSKEIETTITAEGGEIVF 159 Rotavirus A
2GU0_B  80 VNLLADTLNMVSMpTEKFQFDIVKTVVQVRHLENLLCRIKDVNDILNANVKLRVKAVMIACNLVNETETTPLTESNDIVY 159 Rotavirus C
6CYA_A 160 QNAAFTMWKLTYLEHQLMPILDQnfiEYKVTLNEDKPISDVHVKELVAELRWQYNKFAVITHGKGHYRIVKYSSVANHAD 239 Rotavirus A
2GU0_B 160 QDSYFTITKLDYSNHKLLPLMAD---EYKITINTKTDIPDRNQTAFAAYIRYNFNKFAAISHGKRHWRLVLHSQLMSHAE 236 Rotavirus C
6CYA_A 240 RVYATFKSNVKTGVNNDFNLLDQRIIWQNWYAFTSSMKQGNTLDVCKRLLFqKMKPEKNpFKGLSTDRKMDEVAQVG 316 Rotavirus A
2GU0_B 237 RLDRKIKSDKKHGRQFSYDDGDMAFVHPGWKTCIGQLCGGTTFEVAKTSLY-SIKPSKT-VRTATNKIESDLISMVG 311 Rotavirus C
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