Conserved Protein Domain Family
COX2

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MTH00140: COX2 
cytochrome c oxidase subunit II; Provisional
Statistics
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PSSM-Id: 214430
Aligned: 79 rows
Threshold Bit Score: 207.484
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
18603210    1 MSQWYQVDFPYPSSAMGCLLHTYHDSVLVIVVLVFFGVGWFLTLFLFNSLGLkgslnHTVTENEKMDIFWMVAPFVFLCG 80 
153123681   1 MLEWSQTSLPEPASVQAFNLQIVYEGCLVVAVFISFVVLFFMRMVVFNTATC-----SVYLECGRLEVFWSVLPFIFLVC 75 
71657936    1 MMDWKATSLPEPASEQAYNLLVVYEVCLLLGFFIVVVVLWFLRLAVFNQISC-----STYLEAPRLEFLWSIVPFFLLVG 75 
68989137    1 MSYWCQMYFQNGVTFASMRVQWAFGMYCVVLMLIFVFVMLSVLLCCSGAHQF-----INMNTDHNLERVWGTVPMLILIF 75 
215399162   2 CSYCGFMVSPDGC---------------------------------FNKLTC-----ATYLECARLELFWSITPLFLLAM 43 
224587986   1 ------MSFPEPLTLQAYNLQVVYEYALLLSLFVMLIVSWFLRMAVFNRITC-----ATYLECPFLELFWGSFPIVLLVV 69 
238908486   1 MAKWGQFNFPDFNSEMAARLFYYHDLALIVVVVISVLVLSSLVFCLFSKVFVgesmnLKVKNDNLLEVSWSTFPFFILCG 80 
254033636   1 MLEWSQTSLPEPASVQAFNLQIVYEGCLVVAVFISFVVLFFMRMVVFNTATC-----SVYLECGRLEVFWSVLPFIFLVC 75 
292496227   1 MSYWCQMYFQNGVTFTSMRVQWAFGMYCVVLMLIFVFVMFSVLLCCSDAHQF-----AYMNTDHNLERIWGTVPLLILVF 75 
292496240   1 MSYWCQMYFQNSVTFAGMRVQWVFGMYCAVLTLIFIFVMLSVVMCLITPHQF-----LYAQTDHTLERIWGLVPLLILTF 75 
18603210   81 IGYISFFNLYEMEVGD-NV-NYEVSMIGDQWCWEYHYifdlnsyfsisdevyslfvkefckekslalekygDMTVgppse 158
153123681  76 ICSISVFALYVNDETQwGSfSWCSSSLPHQWYWSYQVgvd-----------------------------ggPEVf----- 121
71657936   76 MCSVSVVALYVNDETNeSP-VADVMVVGHQWYWSYSMmg-------------------------------gPGFDlp--- 120
68989137   76 LSWPSMGLLYVLSELE-TP-LITVKCIGHQWYWEYEY----------------------------------SDFLv---- 115
215399162  44 MCSISVYVLYVNDETNtAP-YMDVTVVGHQWYWSYKIgi-------------------------------gSGSNc---- 87 
224587986  70 MCGISTYALYVNDETYkSP-ALDVTVTGHQWYWSYKImv-------------------------------gEGCDy---- 113
238908486  81 LGFVSLKNLYDMEVGE-KV-KFLMKVTGHQWYWEYSYetnfsnl---------------------ndkcefSNFVkysvl 137
254033636  76 ICSISVFALYVNDETNeDP-LVDVVVVGHQWYWSYQVgvd-----------------------------ggPEVf----- 120
292496227  76 LSWPSMGLLYILSELE-TP-LITVKCIGHQWYWEYEY----------------------------------TDFVv---- 115
292496240  76 LSWPSMGLLYAMSELE-TP-LITVKCVGHQWYWEYEY----------------------------------SDFSv---- 115
18603210  159 mmsslmppysgsfssayyyyflmntmevhgsysnmalmhayktmdaksgyymvqktvevvledfrlinsslmemvfssif 238
153123681     --------------------------------------------------------------------------------    
71657936      --------------------------------------------------------------------------------    
68989137      --------------------------------------------------------------------------------    
215399162     --------------------------------------------------------------------------------    
224587986     --------------------------------------------------------------------------------    
238908486 138 gwdinmekvvswmligrdsfdfdivfngastevyddkdfldndsdvsyfnlvvslkdsmdggktdsltkevfdqlegfyg 217
254033636     --------------------------------------------------------------------------------    
292496227     --------------------------------------------------------------------------------    
292496240     --------------------------------------------------------------------------------    
18603210  239 ekwlvsncsvetkifssvssvagpwemglwelflkgewvlRYNSYTVPEEglnmgksnI-YNYGGFRNQELGGSRYLYCE 317
153123681 122 ----------------------------------------KWDSRIVSRS--------VdSPMDFQDYWTVDRPLPVPVG 153
71657936  121 ---------------------------------------lEWDSRAEGRS--------SsSGVDFFDLMKVDWVLSVPVK 153
68989137  116 ---------------------------------------vSYNSYMIPES--------E-LKLGEPRLLTVDKSMVLPFS 147
215399162  88 ---------------------------------------lEWESRLVSRS--------AdSGIGFMDLFTVDQPLMIPVG 120
224587986 114 ---------------------------------------mEWDSRLVLRE--------EgSEIGFLDLLTVDRPLMVPIN 146
238908486 218 rkegltyeidellslvggrfsgrtvlrgiislylsgewylKYDSYLVPEEfmidrslyS-LKSSGFRNQDVSAPCFLARS 296
254033636 121 ----------------------------------------KWDSRIVSRS--------VdSPMDFQDYWTVDRPLPVPVG 152
292496227 116 ---------------------------------------vSYNSYMVPED--------E-LKLGEPRLLTVDKSMVLPFS 147
292496240 116 ---------------------------------------vSYNSYMVPEK--------E-LNLGEPRLLTVDKSMVLPFS 147
18603210  318 VKNEILVSTSDVLHSWGVSELGVKVDAILGRVKVISVEPALPVIFYSVYHELCGSGHSEIPTCV--------------VV 383
153123681 154 GVTRVLVTSEDVLHSWGAPRLLLKIDAIPGRLTRGLFELKLPGVIKGMCVELCGAYHSMMPTII--------------EG 219
71657936  154 KLVRVLVTSDDVLHSWGCPRLFMKVDAIPGRLTRGLFKVMQPGVFHGMCVELCGLLHSLMPTVV--------------ES 219
68989137  148 VWCRILTTSFDVVHSWTVPAFGVKSDAVPGRLSESSVKVEMPGVFWGQCSEICGALHSFMPIRV--------------EV 213
215399162 121 QLIRVLVTSDDVIHSWGAPGLGIKLDAIPGRLSRGLFEVKLPCIIYGMCMELCGSLHGLMPTVI--------------QA 186
224587986 147 VLVRVFVTSEDVIHSWGAPGMGIKMDAIPGRLTRGLFELKLPGIIFGMCAELCGAMHSMMPTIV--------------EG 212
238908486 297 QKNEVLVHTADVMHSWGVSELGVKADAVPGRVNSLKVVPLRSGVSFGFCYELCGAGHSQMPIVVfsvnkmdldwiiktNV 376
254033636 153 GVTRVLVTSEDVLHSWGAPRLHLKIDAIPGRLTRGLFELKLPGVIKGMCVELCGAYHSMMPTII--------------EG 218
292496227 148 VWCRILTTSFDVVHSWTVPAFGVKSDAVPGRLSESSVKVEMPGVFWGQCSEICGALHSFMPIRV--------------EV 213
292496240 148 VWCRVLTTSFDVIHSWTVPAFGVKSDAVPGRLSESSVKVEMPGVFWGQCSEICGALHSFMPIRV--------------EV 213
18603210  384 ILYESLVSMMK 394
153123681 220 FGEADFWQWAS 230
71657936  220 VPFLYWRNW-- 228
68989137  214 VSSEAFFKWLT 224
215399162 187 VPTEVFSAWEH 197
224587986 213 VPLAVYESWLG 223
238908486 377 LETDSVLDYME 387
254033636 219 LGEADFWQWAS 229
292496227 214 VSSEMFSKWLW 224
292496240 214 VSCRVFEQWMG 224
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