5MG3,3AQP,5XAN


Conserved Protein Domain Family
SecF

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COG0341: SecF 
Preprotein translocase subunit SecF [Intracellular trafficking, secretion, and vesicular transport]
Statistics
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PSSM-Id: 440110
Aligned: 874 rows
Threshold Bit Score: 204.9
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5MG3_F         9 QLNHG--RKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEIT-LEKPAEIDVMRDALQKAG--F-EE 82  
WP_079535383 517 RFI----KKDINFVGQTKVFLTISAVAVVVFVGAMCIRGFNFGIEFVGGSSITYA-DAKGVSTEELRQAFNEVG--Q-DN 588 
WP_015778804 528 RFI----KHDINFLGARKVFLSIAALAMVLCALVIGVRGLNLGIEFVGGTSIEFN-ETGSVTTDQVRSAFAAAG--E-SD 599 
WP_074777339 526 RFI----KHDINFLGYRKVFLTVAAVVMVLSAVIIGVRGLNLGIEFIGGTSITFT-DTGSVTTDQMRSAFAEAG--E-PD 597 
WP_049761262   1 ------mfERLDFVRRWRLWFAISGILLAAGILAIALGRLEFGIDFQGGVQFTAAdASRRLGEGELRDQLPPF---VrQD 71  
WP_015760327 527 KFI----KHDINFLGYRRVFLGVAAVLVCVSLAIVGVKGLNFGIEFVGGTSVSFH-GTGDVTTEQMRTAFDQAG--E-PD 598 
WP_013251600   1 --mRShfSREIPIIYHRRQFLAISGMLVVLAIVGLVARGLVFGIEFKGGTEIDFH-DTGSISIGQMRSALVSAG--E-ED 74  
WP_012797882 493 RFI----KHDFNILGWRKVTLTAAVVAVVLVLAILGIRGINFGIEFVGGTSVAFH-NTGDVTIEQLRDAFDEAG--E-TD 564 
BAN02308      14 RLFRG--QTAIDFYGRRRIALVVGIVVVVATFGSLFTRGLNLGLDFEGGQAWDVP-AGETFGVDEAEDVLGDNGvsI-TG 89  
WP_022739568 525 RFI----KRDINFLGYRKVFLTVAAVAMVACLAIVGFRGLNFGIEFVGGTSVAFH-GTGDITTEQMREAFNDAG--E-PD 596 
5MG3_F        83 PMLQNFGSSHD--IMVRMPPAEGetgGQVlgSQVLKVINESTNqNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVY 160 
WP_079535383 589 ATIQTAQTDGQegYIVRIPVTDS---NQA--NDIAKQVQDKFGyEAQDTSVNVIGPDWGESIVQSSLIAFLVSMLLIIVY 663 
WP_015778804 600 AVIQTTESNGEpgFIVRIANTDA---SAA--AGAATQVAQSLNlSTDSFQVSTIGPDWGASIIQSMVIALLVSFVLIIIY 674 
WP_074777339 598 AVIQTTANNGEagFIVRTTNADA---AES--AGEAMTVANSLGlSSNNFQVSTIGPDWGTSVIQAMFIALIVSFILIIVY 672 
WP_049761262  72 AVIQRLGEEG---YEVRTPVLNR---QQT--NQVQRAVQEALG---AEVSVTSVSPSFGEQVRDQALQAVAASLLLIVFF 140 
WP_015760327 599 AVVQTTNADGDegYLVRTTTTSA---EEA--TQRANQVADSLGlSTDSFEVTTIGPDWGASVIQSSLIAFLVSIVLIIIY 673 
WP_013251600  75 PTVQTSvTEGAqgFLVRSDTIDP---KTA--NQHAAAAASSLGlGGESYTVTTIGPDWGADVTRSSAMAFGVAILLIIAY 149 
WP_012797882 565 AVIQTTETDGEpgFLVRTTTTSA---EDA--NVAAKAVADTFGwETDSFEVTTIGPDWGTSVIKSSVIAFLVSLILIIIY 639 
BAN02308      90 SKIQTRSSDDTsfVTVQIEEVST---EVA--DQLTSDFAAAAGvEIEDVSFSFTSASWGGDITEKAVRALVIFLVVVAIF 164 
WP_022739568 597 AVIQTTETGGEpgFLVRTTTTSA---EDA--TAHANQVAEALGmTSSDFEVTTIGPDWGASVIQSSLIAFLVSILLIIVY 671 
5MG3_F       161 VGFRF-EWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKI--R-RGTPYEI 236 
WP_079535383 664 IAIRF-EWKMGVVAIIALLHDLIIVMGIYAVFGREVNPNTIAALLTILGYSLYDTVVTFHRVNDNMATE--GiKCTFATM 740 
WP_015778804 675 IAIRF-EYKMGITAIIALLHDIILVVGVYALVGREINPNTIAALLTILGYSLYDTVVVFHRISDNMQHS--EiKCTFMTM 751 
WP_074777339 673 IALRFrQYKMGVTAIVALVHDILLVVGIYALVGREINPNVVAALLTILGYSLYDTVVVFHRISDNMEHS--EvPCTFMTM 750 
WP_049761262 141 ITVRY-EFAFALAAMAALVHDILMTVGFYAIVGREVNLVTVVAVLTVLGYSLYDTVIIFDRIRENSPSVgyN-RRRFDEV 218 
WP_015760327 674 IAIRF-EYKMGVTAIVALLHDLVLVMGVYALVGREVNPNTIAALLTILGYSLYDTVVVFHRINDNMQSD--DiKCTFMTM 750 
WP_013251600 150 VSVRY-EFKMSITAVIALLHDLLITLGVYAWTQTAITPNVVAALLTIMGYSLYDTVVEFNRMNENAKQLkdgvHRTYYQI 228 
WP_012797882 640 ISIRFrDYKMGVTAIVALLHDLILVFGIYALIGREVTPNTIAAVLTILGYSLYDTVVVFRSIDDNMKGD--SiKCTFMSM 717 
BAN02308     165 ISLRF-EWRMALAALAAMGHDLILAVGVYTIFQFEVTPATVIAFLTILGYSLYDTIVVFDRVKENEGKYag-vRMPYPDV 242 
WP_022739568 672 IAIRF-EYKMGVMAIVALFHDLILVVGIYALVGREVNPNTIAALLTILGYSLYDTVVVFHRINDNMKGE--DiRCTFMTM 748 
5MG3_F       237 FNVSLTQTLHRTLITSGTTLMVILMLYLF-----GGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGM-K 302 
WP_079535383 741 ANHSINQVLIRTINTTVTSFVPVFFMLFF-----GGETLKDFAFAMSIGLIAGAYSSFAVAVPIYTLWKT-R 806 
WP_015778804 752 ANHSMNQVFMRSINTTLTSIIPVLAMLLF-----GSETLKDFAFAMTIGLLAGAYSSIAIACPLFAIWKT-R 817 
WP_074777339 751 ANHSMNQVFIRSINTTLTSIIPVFAMLLF-----GSETLQDFAFAMVIGLLAGAYSSIAIACPLFAIWKS-R 816 
WP_049761262 219 INTSIRQVIRRSIYTSVSTLIPITALLVF-----GRSTLTDFAFALLVGIVAGTYSSIFIASPILSLYKAwR 285 
WP_015760327 751 ANHSINQVLVRTINTTLTSLIPVLAMLLF-----GGETLKDFAFAMVIGLVCGSYSSIAVASPLYAMWKT-R 816 
WP_013251600 229 CNFSINEVFVRTINTTITSLVPVVAMLLL-----GGATLKDFAFAMLVGELLGTWSSFAVASPLLAIWKT-R 294 
WP_012797882 718 ANHSLNQVLIRSLNTSITSLIPVLFMLLF-----GAETLKDFALAMTIGLVSGCYSSLAIATPLYAIWKT-R 783 
BAN02308     243 VNISMNQVLMRSINTSLSSVLPVVSLLLVgagflGAVTLREFALALLVGMLAGVYSSIFVASPVLAALKA-N 313 
WP_022739568 749 ANHSMNQVFIRTINTTLTSFIPVFAMLLF-----GGETLKDFAFAMAIGLIAGSYSSVAIACPLYCLWKT-R 814 
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