Search Toolkit Book for CTx_evidence
#include <objects/seqfeat/Tx_evidence.hpp>
Inheritance diagram for CTx_evidence:
Collaboration diagram for CTx_evidence:
Public Member Functions | |
| CTx_evidence (void) | |
| ~CTx_evidence (void) | |
| Public Member Functions inherited from CTx_evidence_Base | |
| CTx_evidence_Base (void) | |
| virtual | ~CTx_evidence_Base (void) |
| DECLARE_INTERNAL_TYPE_INFO () | |
| bool | IsSetExp_code (void) const |
| Check if a value has been assigned to Exp_code data member. More... | |
| bool | CanGetExp_code (void) const |
| Check if it is safe to call GetExp_code method. More... | |
| void | ResetExp_code (void) |
| Reset Exp_code data member. More... | |
| TExp_code | GetExp_code (void) const |
| Get the Exp_code member data. More... | |
| void | SetExp_code (TExp_code value) |
| Assign a value to Exp_code data member. More... | |
| TExp_code & | SetExp_code (void) |
| Assign a value to Exp_code data member. More... | |
| bool | IsSetExpression_system (void) const |
| Check if a value has been assigned to Expression_system data member. More... | |
| bool | CanGetExpression_system (void) const |
| Check if it is safe to call GetExpression_system method. More... | |
| void | ResetExpression_system (void) |
| Reset Expression_system data member. More... | |
| void | SetDefaultExpression_system (void) |
| Assign default value to Expression_system data member. More... | |
| TExpression_system | GetExpression_system (void) const |
| Get the Expression_system member data. More... | |
| void | SetExpression_system (TExpression_system value) |
| Assign a value to Expression_system data member. More... | |
| TExpression_system & | SetExpression_system (void) |
| Assign a value to Expression_system data member. More... | |
| bool | IsSetLow_prec_data (void) const |
| Check if a value has been assigned to Low_prec_data data member. More... | |
| bool | CanGetLow_prec_data (void) const |
| Check if it is safe to call GetLow_prec_data method. More... | |
| void | ResetLow_prec_data (void) |
| Reset Low_prec_data data member. More... | |
| void | SetDefaultLow_prec_data (void) |
| Assign default value to Low_prec_data data member. More... | |
| TLow_prec_data | GetLow_prec_data (void) const |
| Get the Low_prec_data member data. More... | |
| void | SetLow_prec_data (TLow_prec_data value) |
| Assign a value to Low_prec_data data member. More... | |
| TLow_prec_data & | SetLow_prec_data (void) |
| Assign a value to Low_prec_data data member. More... | |
| bool | IsSetFrom_homolog (void) const |
| experiment actually done on Check if a value has been assigned to From_homolog data member. More... | |
| bool | CanGetFrom_homolog (void) const |
| Check if it is safe to call GetFrom_homolog method. More... | |
| void | ResetFrom_homolog (void) |
| Reset From_homolog data member. More... | |
| void | SetDefaultFrom_homolog (void) |
| Assign default value to From_homolog data member. More... | |
| TFrom_homolog | GetFrom_homolog (void) const |
| Get the From_homolog member data. More... | |
| void | SetFrom_homolog (TFrom_homolog value) |
| Assign a value to From_homolog data member. More... | |
| TFrom_homolog & | SetFrom_homolog (void) |
| Assign a value to From_homolog data member. More... | |
| virtual void | Reset (void) |
| Reset the whole object. More... | |
| Public Member Functions inherited from CSerialObject | |
| CSerialObject (void) | |
| virtual | ~CSerialObject (void) |
| virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
| virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| Set object to copy of another one. More... | |
| virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| Check if both objects contain the same values. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| void | ThrowUnassigned (TMemberIndex index) const |
| void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
| bool | HasNamespaceName (void) const |
| Check if object data type has namespace name. More... | |
| const string & | GetNamespaceName (void) const |
| Get namespace name. More... | |
| bool | HasNamespacePrefix (void) const |
| Check if data type has namespace prefix. More... | |
| const string & | GetNamespacePrefix (void) const |
| Get namespace prefix. More... | |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) noexcept |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const noexcept |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const noexcept |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const noexcept |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const noexcept |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const noexcept |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
Private Types | |
| typedef CTx_evidence_Base | Tparent |
Private Member Functions | |
| CTx_evidence (const CTx_evidence &value) | |
| CTx_evidence & | operator= (const CTx_evidence &value) |
Additional Inherited Members | |
| Public Types inherited from CTx_evidence_Base | |
| enum | EExp_code { eExp_code_unknown = 0 , eExp_code_rna_seq = 1 , eExp_code_rna_size = 2 , eExp_code_np_map = 3 , eExp_code_np_size = 4 , eExp_code_pe_seq = 5 , eExp_code_cDNA_seq = 6 , eExp_code_pe_map = 7 , eExp_code_pe_size = 8 , eExp_code_pseudo_seq = 9 , eExp_code_rev_pe_map = 10 , eExp_code_other = 255 } |
| enum | EExpression_system { eExpression_system_unknown = 0 , eExpression_system_physiological = 1 , eExpression_system_in_vitro = 2 , eExpression_system_oocyte = 3 , eExpression_system_transfection = 4 , eExpression_system_transgenic = 5 , eExpression_system_other = 255 } |
| enum class | E_memberIndex { e__allMandatory = 0 , e_exp_code , e_expression_system , e_low_prec_data , e_from_homolog } |
| typedef EExp_code | TExp_code |
| typedef EExpression_system | TExpression_system |
| typedef bool | TLow_prec_data |
| typedef bool | TFrom_homolog |
| typedef Tparent::CMemberIndex< E_memberIndex, 5 > | TmemberIndex |
| Public Types inherited from CObject | |
| enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
| Control filling of newly allocated memory. More... | |
| typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More... | |
| typedef atomic< Uint8 > | TCounter |
| Counter type is std::atomic<> More... | |
| typedef TCounter::value_type | TCount |
| Alias for value type of counter. More... | |
| Static Public Member Functions inherited from CTx_evidence_Base | |
| static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME() | EExp_code (void) |
| Access to EExp_code's attributes (values, names) as defined in spec. More... | |
| static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME() | EExpression_system (void) |
| Access to EExpression_system's attributes (values, names) as defined in spec. More... | |
| Static Public Member Functions inherited from CSerialObject | |
| static void | SetVerifyDataThread (ESerialVerifyData verify) |
| static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
| static string | UnassignedString (void) |
| static CStringUTF8 | UnassignedStringUTF8 (void) |
| static char | UnassignedByte (void) |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
| Static Public Attributes inherited from CSerialObject | |
| static const char * | ms_UnassignedStr = "<*unassigned*>" |
| static const char | ms_UnassignedByte = char(0xcd) |
| Static Public Attributes inherited from CObject | |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More... | |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More... | |
| static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More... | |
| static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More... | |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
| static const TCount | eCounterStateMask |
| Valid object, and object in heap. More... | |
| Protected Member Functions inherited from CObject | |
| virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More... | |
Detailed Description
CTx_evidence –.
Definition at line 65 of file Tx_evidence.hpp.
The documentation for this class was generated from the following files:
- include/objects/seqfeat/Tx_evidence.hpp
- src/objects/seqfeat/Tx_evidence.cpp
