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Report for CCDS33714.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33714.1 Public Homo sapiens 3 TBC1D5 24 110 108 CCDS HistoryNCBI Gene:9779Re-query CCDS DB by CCDS ID:33714.1Re-query CCDS DB by GeneID:9779See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33714.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253692.11 ENSP00000253692.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000253692.11Link to Ensembl Protein Viewer:ENSP00000253692.6Re-query CCDS DB by Nucleotide ID:ENST00000253692Re-query CCDS DB by Protein ID:ENSP00000253692
Original member Current member EBI ENST00000429383.8 ENSP00000398127.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000429383.8Link to Ensembl Protein Viewer:ENSP00000398127.4Re-query CCDS DB by Nucleotide ID:ENST00000429383Re-query CCDS DB by Protein ID:ENSP00000398127
Original member Current member NCBI NM_001349076.2 NP_001336005.1 Accepted alive Link to Nucleotide Sequence:NM_001349076.2Link to Protein Sequence:NP_001336005.1Re-query CCDS DB by Nucleotide ID:NM_001349076Re-query CCDS DB by Protein ID:NP_001336005Link to BLAST:NP_001336005.1
Original member Current member NCBI NM_001349077.2 NP_001336006.1 Accepted alive Link to Nucleotide Sequence:NM_001349077.2Link to Protein Sequence:NP_001336006.1Re-query CCDS DB by Nucleotide ID:NM_001349077Re-query CCDS DB by Protein ID:NP_001336006Link to BLAST:NP_001336006.1
Original member Current member NCBI NM_001349078.2 NP_001336007.1 Accepted alive Link to Nucleotide Sequence:NM_001349078.2Link to Protein Sequence:NP_001336007.1Re-query CCDS DB by Nucleotide ID:NM_001349078Re-query CCDS DB by Protein ID:NP_001336007Link to BLAST:NP_001336007.1
Original member Current member NCBI NM_001349079.2 NP_001336008.1 Accepted alive Link to Nucleotide Sequence:NM_001349079.2Link to Protein Sequence:NP_001336008.1Re-query CCDS DB by Nucleotide ID:NM_001349079Re-query CCDS DB by Protein ID:NP_001336008Link to BLAST:NP_001336008.1
Original member Current member NCBI NM_001349080.2 NP_001336009.1 Accepted alive Link to Nucleotide Sequence:NM_001349080.2Link to Protein Sequence:NP_001336009.1Re-query CCDS DB by Nucleotide ID:NM_001349080Re-query CCDS DB by Protein ID:NP_001336009Link to BLAST:NP_001336009.1
Original member Current member NCBI NM_014744.2 NP_055559.1 Accepted alive Link to Nucleotide Sequence:NM_014744.2Link to Protein Sequence:NP_055559.1Re-query CCDS DB by Nucleotide ID:NM_014744Re-query CCDS DB by Protein ID:NP_055559Link to BLAST:NP_055559.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001336005.1 795 Q92609-1 795 100% 0 0
NP_001336006.1 795 Q92609-1 795 100% 0 0
NP_001336007.1 795 Q92609-1 795 100% 0 0
NP_001336008.1 795 Q92609-1 795 100% 0 0
NP_001336009.1 795 Q92609-1 795 100% 0 0
NP_055559.1 795 Q92609-1 795 100% 0 0

Chromosomal Locations for CCDS 33714.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 17160963 17161256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17166767 17166928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17167749 17167828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17185109 17185208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17214207 17214370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17238163 17238419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17258506 17258591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17291895 17292001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17307992 17308134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17372075 17372247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17374471 17374540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17374629 17374679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17376525 17376613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17383913 17384015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17403181 17403248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17404694 17404768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17404872 17404961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17406418 17406526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17428450 17428519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 17508474 17508570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2388 nt):
ATGTATCATTCCTTATCTGAAACTAGACATCCTCTGCAGCCAGAAGAACAAGAAGTAGGCATTGACCCCT
TGTCCAGTTACTCTAACAAGTCTGGAGGAGATTCAAATAAAAATGGAAGAAGAACAAGTTCTACTTTAGA
CTCTGAAGGGACTTTTAATTCCTATAGGAAAGAATGGGAAGAACTATTTGTAAACAACAATTACTTGGCA
ACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTAT
TTCTTTGTGTTCTTCCTCAAGACAAAAGTCAATGGATAAGTAGAATTGAAGAATTAAGAGCATGGTATAG
CAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAAT
CCTCTTTCACAGGATGAAGGGAGTCTTTGGAACAAATTCTTCCAAGATAAAGAACTTCGATCAATGATTG
AACAAGATGTCAAAAGAACGTTTCCTGAAATGCAGTTTTTCCAGCAAGAAAATGTGAGAAAAATTCTTAC
AGATGTTCTTTTCTGTTATGCCAGAGAAAACGAGCAGTTGCTTTATAAACAGGGCATGCACGAACTGTTA
GCACCTATAGTCTTTGTCCTTCACTGTGACCACCAAGCTTTTCTACATGCCAGTGAGTCTGCACAGCCCA
GTGAGGAAATGAAAACTGTCTTGAACCCTGAGTATCTGGAACATGATGCCTATGCAGTGTTCTCACAACT
TATGGAAACTGCTGAACCTTGGTTTTCAACTTTTGAGCATGATGGTCAGAAGGGGAAAGAAACACTGATG
ACTCCCATTCCCTTTGCTAGACCACAAGATTTAGGGCCAACAATTGCTATTGTTACTAAAGTCAACCAGA
TCCAGGATCATCTACTGAAGAAGCATGATATTGAGCTTTACATGCACTTGAACAGACTAGAAATTGCACC
ACAGATATATGGGTTAAGGTGGGTGCGGCTGCTATTTGGACGAGAGTTCCCCCTGCAGGACCTTCTGGTG
GTCTGGGATGCCTTGTTTGCAGACGGCCTCAGCCTGGGTTTAGTAGATTATATCTTCGTAGCCATGTTAC
TTTACATCCGAGATGCTTTGATCTCTAGTAACTACCAGACCTGTCTCGGCCTTCTGATGCATTACCCATT
CATCGGGGATGTACACTCACTGATTCTTAAGGCTCTGTTCCTTAGAGATCCAAAGAGAAATCCAAGACCA
GTGACTTATCAATTCCATCCAAATTTAGATTATTACAAAGCACGAGGAGCAGACCTCATGAATAAAAGCC
GGACCAATGCCAAAGGTGCTCCCCTGAATATAAATAAGGTCTCTAATAGCCTGATTAATTTTGGAAGAAA
GTTGATTTCCCCAGCAATGGCTCCAGGCAGTGCAGGTGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCC
TCCTCTGTTGTAATTCCTACCAGGACCTCAGCAGAGGCCCCAAGCCATCACTTGCAACAGCAACAGCAGC
AGCAGAGGCTGATGAAATCAGAAAGCATGCCTGTGCAATTGAACAAAGGGCTAAGTTCTAAAAACATCAG
TTCATCTCCAAGCGTTGAGAGTTTGCCTGGAGGAAGAGAATTCACTGGCTCTCCACCTTCATCTGCTACT
AAAAAAGATTCCTTTTTTAGCAACATCTCACGTTCTCGCTCACACAGCAAAACTATGGGCAGAAAAGAAT
CTGAAGAAGAATTAGAAGCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGACCTGGATGCCATGTGCAA
ATACTGTGCAAAGGTGATGGACACTCATCTTGTAAATATTCAAGATGTGATATTACAAGAAAATTTGGAA
AAAGAAGATCAAATTCTGGTTTCCCTGGCAGGATTAAAACAGATCAAAGACATTCTAAAAGGTTCCCTGC
GTTTTAACCAGAGCCAGCTAGAGGCCGAAGAGAACGAACAGATCACCATTGCGGACAACCACTACTGCTC
CAGCGGCCAGGGCCAGGGCCGAGGCCAAGGCCAGAGCGTTCAAATGTCAGGGGCCATTAAACAGGCCTCT
TCAGAAACGCCAGGGTGCACTGATAGAGGGAATTCCGATGACTTCATCCTGATTTCCAAAGATGATGATG
GGAGCAGTGCCAGGGGCTCCTTCTCCGGCCAGGCCCAGCCTCTTCGCACCCTCAGAAGCACCTCTGGGAA
AAGCCAGGCCCCAGTCTGCTCCCCACTGGTGTTCTCAGATCCACTGATGGGCCCAGCCTCAGCTTCCTCC
AGCAACCCCAGCTCCAGTCCTGATGACGACAGCAGCAAGGACTCTGGCTTCACCATTGTGAGTCCCCTGG
ACATCTGA

Translation (795 aa):
MYHSLSETRHPLQPEEQEVGIDPLSSYSNKSGGDSNKNGRRTSSTLDSEGTFNSYRKEWEELFVNNNYLA
TIRQKGINGQLRSSRFRSICWKLFLCVLPQDKSQWISRIEELRAWYSNIKEIHITNPRKVVGQQDLMINN
PLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEMQFFQQENVRKILTDVLFCYARENEQLLYKQGMHELL
APIVFVLHCDHQAFLHASESAQPSEEMKTVLNPEYLEHDAYAVFSQLMETAEPWFSTFEHDGQKGKETLM
TPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLV
VWDALFADGLSLGLVDYIFVAMLLYIRDALISSNYQTCLGLLMHYPFIGDVHSLILKALFLRDPKRNPRP
VTYQFHPNLDYYKARGADLMNKSRTNAKGAPLNINKVSNSLINFGRKLISPAMAPGSAGGPVPGGNSSSS
SSVVIPTRTSAEAPSHHLQQQQQQQRLMKSESMPVQLNKGLSSKNISSSPSVESLPGGREFTGSPPSSAT
KKDSFFSNISRSRSHSKTMGRKESEEELEAQISFLQGQLNDLDAMCKYCAKVMDTHLVNIQDVILQENLE
KEDQILVSLAGLKQIKDILKGSLRFNQSQLEAEENEQITIADNHYCSSGQGQGRGQGQSVQMSGAIKQAS
SETPGCTDRGNSDDFILISKDDDGSSARGSFSGQAQPLRTLRSTSGKSQAPVCSPLVFSDPLMGPASASS
SNPSSSPDDDSSKDSGFTIVSPLDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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