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Report for CCDS58943.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58943.1 Public Homo sapiens 5 TARS1 24 110 108 CCDS HistoryNCBI Gene:6897Re-query CCDS DB by CCDS ID:58943.1Re-query CCDS DB by GeneID:6897See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58943.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000455217.6 ENSP00000387710.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455217.6Link to Ensembl Protein Viewer:ENSP00000387710.2Re-query CCDS DB by Nucleotide ID:ENST00000455217Re-query CCDS DB by Protein ID:ENSP00000387710
Original member Current member NCBI NM_001258438.2 NP_001245367.1 Accepted alive Link to Nucleotide Sequence:NM_001258438.2Link to Protein Sequence:NP_001245367.1Re-query CCDS DB by Nucleotide ID:NM_001258438Re-query CCDS DB by Protein ID:NP_001245367Link to BLAST:NP_001245367.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001245367.1 756 P26639-2 756 100% 0 0

Chromosomal Locations for CCDS 58943.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 33441087 33441143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33445324 33445404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33448541 33448731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33452341 33452439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33453289 33453412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33454945 33455066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33455587 33455704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33456002 33456066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33456149 33456227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33457257 33457403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33458566 33458664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33459695 33459861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33460902 33461064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33461158 33461295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33461667 33461744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33461906 33462006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33462099 33462203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33463753 33463825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33466871 33466985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 33467560 33467708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2271 nt):
ATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGCGAGGAGAAGCCGATTGGTGCTGGTG
AAGAGAAGCAAAAGGAAGGAGGCAAAAAGAAGAACAAAGAAGGATCTGGAGATGGAGGTCGAGCTGAGTT
GAATCCTTGGCCTGAATATATTTACACACGTCTTGAGATGTATAATATACTAAAAGCAGAACATGATTCC
ATTCTGGCAGAAAAGGCAGAAAAAGATAGCAAGCCAATTAAAGTCACTTTGCCTGATGGTAAACAGGTTG
ATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGTCACACAGCTTCCTGCAAAAA
CCTCTCTTCACTTGCATCTCTGCTTGCATCTGTGGCCATTCCCTCATCTGGAATGCCATGGCCTCCTCTT
TTCTTCCTTCAAGGCCTGGCCGACAACACCGTTATTGCTAAAGTAAATAATGTTGTGTGGGACCTGGACC
GCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCAGTGTATTG
GCACTCTAGTGCTCACATAATGGGTGAAGCCATGGAAAGAGTCTATGGTGGATGTTTATGCTACGGTCCG
CCAATAGAAAATGGATTCTATTATGACATGTACCTCGAAGAAGGGGGTGTGTCTAGCAATGATTTCTCTT
CTCTGGAGGCTTTGTGTAAGAAAATCATTAAAGAAAAACAAGCTTTTGAAAGACTGGAAGTTAAGAAAGA
AACTTTACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCA
ACTACCACAGTCTATAGATGTGGCCCTTTGATAGATCTCTGCCGGGGTCCTCATGTTAGACACACGGGCA
AAATTAAGGCTTTAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCT
CCAGAGAATTTATGGCATTTCATTCCCAGATCCTAAAATGTTGAAAGAGTGGGAGAAGTTCCAAGAGGAA
GCTAAAAACCGAGATCATAGGAAAATTGGCAGGGACCAAGAACTATATTTCTTTCATGAACTCAGCCCTG
GAAGTTGCTTTTTTCTGCCAAAAGGAGCCTACATTTATAATGCACTTATTGAATTCATTAGGAGCGAATA
TAGGAAAAGAGGATTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGCCGACTCTGGATGACCTCGGGC
CACTGGCAGCACTACAGCGAGAACATGTTCTCCTTTGAGGTGGAGAAGGAGCTGTTTGCCCTGAAACCCA
TGAACTGCCCAGGACACTGCCTTATGTTTGATCATCGGCCAAGGTCCTGGCGAGAACTGCCTCTGCGGCT
AGCTGATTTTGGGGTACTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGA
TTCCAACAGGATGATGCTCACATATTCTGTGCCATGGAGCAGATTGAAGATGAAATAAAAGGTTGTTTGG
ATTTTCTACGTACGGTATATAGCGTATTTGGATTTTCTTTTAAACTAAACCTTTCTACTCGCCCGGAAAA
ATTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAAAACAGTCTGAATGAATTTGGT
GAAAAGTGGGAGTTAAACTCTGGAGATGGAGCTTTCTATGGCCCAAAGATTGACATACAGATTAAAGATG
CGATTGGGCGGTACCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTTGCCCATCAGATTTAATCTTAC
TTATGTAAGCCATGATGGTGATGATAAGAAAAGGCCAGTGATTGTTCATCGAGCCATCTTGGGATCAGTG
GAAAGAATGATTGCTATCCTCACAGAAAACTATGGGGGCAAATGGCCCTTTTGGCTGTCCCCTCGCCAGG
TAATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGC
CAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAAAAGATTCGAAATGCACAGTTA
GCACAGTATAACTTCATTTTAGTTGTTGGTGAAAAAGAGAAAATCAGTGGCACTGTTAATATCCGCACAA
GAGACAATAAGGTCCACGGGGAACGCACCATTTCTGAAACTATCGAGCGGCTACAGCAGCTCAAAGAGTT
CCGCAGCAAACAGGCAGAAGAAGAATTTTAA

Translation (756 aa):
MFEEKASSPSGKMGGEEKPIGAGEEKQKEGGKKKNKEGSGDGGRAELNPWPEYIYTRLEMYNILKAEHDS
ILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISHTASCKNLSSLASLLASVAIPSSGMPWPPL
FFLQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGP
PIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAMFKYNKFKCRILNEKVNTP
TTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEE
AKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSG
HWQHYSENMFSFEVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRR
FQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFG
EKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSV
ERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQL
AQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQLKEFRSKQAEEEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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