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Report for CCDS30780.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30780.1 Public Homo sapiens 1 FRRS1 24 110 108 CCDS HistoryNCBI Gene:391059Re-query CCDS DB by CCDS ID:30780.1Re-query CCDS DB by GeneID:391059See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 30780.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000287474.9 ENSP00000287474.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000287474.9Link to Ensembl Protein Viewer:ENSP00000287474.4Re-query CCDS DB by Nucleotide ID:ENST00000287474Re-query CCDS DB by Protein ID:ENSP00000287474
Original member Current member NCBI NM_001013660.4 NP_001013682.2 Accepted alive Link to Nucleotide Sequence:NM_001013660.4Link to Protein Sequence:NP_001013682.2Re-query CCDS DB by Nucleotide ID:NM_001013660Re-query CCDS DB by Protein ID:NP_001013682Link to BLAST:NP_001013682.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013682.2 626 Q6ZNA5-2 626 100% 0 0

Chromosomal Locations for CCDS 30780.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 99708898 99709120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99709198 99709259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99710834 99710949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99712105 99712163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99712418 99712515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99715586 99715672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99717410 99717525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99719534 99719647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99728493 99728640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99729650 99729748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99738086 99738268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99740793 99740940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99742179 99742273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99747294 99747430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 99748573 99748768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1881 nt):
ATGGCAGTTTCTGGATTTACTCTTGGTACCTGCATACTTCTGTTGCACATTAGTTATGTGGCTAATTATC
CCAATGGAAAAGTAACACAGTCATGCCATGGAATGATTCCTGAACATGGTCATAGTCCACAGTCTGTTCC
TGTTCATGACATTTACGTGAGTCAGATGACATTCAGGCCAGGAGATCAGATTGAAGTTACTTTGTCAGGG
CATCCATTTAAAGGCTTTCTCCTAGAAGCGCGTAATGCTGAGGATCTGAATGGCCCTCCTATTGGCTCCT
TCACATTGATTGACAGTGAAGTGTCACAACTTTTGACCTGTGAAGATATACAGGGATCAGCAGTGAGTCA
CAGAAGTGCATCTAAAAAAACAGAAATTAAAGTCTACTGGAATGCTCCAAGCAGTGCTCCAAATCACACA
CAGTTTCTAGTCACAGTTGTTGAGAAGTATAAAATCTACTGGGTGAAGATTCCTGGTCCTATAATTTCAC
AACCAAATGCATTTCCTTTTACAACACCTAAAGCTACAGTAGTACCTTTGCCAACGTTACCTCCCGTTTC
CCACTTAACCAAACCATTCAGTGCCTCAGATTGTGGGAACAAGAAGTTCTGTATTAGGAGTCCTTTGAAC
TGTGACCCAGAGAAGGAGGCTTCCTGTGTCTTCTTGTCCTTCACAAGAGATGACCAATCGGTGATGGTTG
AAATGAGCGGCCCCAGTAAAGGCTATTTATCCTTTGCATTGTCTCATGATCAGTGGATGGGTGATGATGA
TGCTTATCTGTGTATTCATGAAGATCAGACTGTGTACATCCAGCCTTCCCATTTAACGGGGCGAAGTCAC
CCTGTAATGGACTCCAGGGATACCCTTGAGGATATGGCTTGGAGGTTGGCGGACGGTGTTATGCAGTGTT
CTTTCAGAAGAAACATTACCCTTCCTGGAGTTAAGAATAGATTTGATCTAAACACAAGCTATTACATATT
TCTAGCAGATGGTGCAGCTAATGATGGTCGAATTTACAAGCACTCTCAGCAACCTTTGATTACCTATGAA
AAATATGATGTGACAGACTCTCCAAAGAACATAGGAGGATCCCATTCTGTACTCCTTCTGAAGGTTCATG
GTGCCTTAATGTTTGTGGCATGGATGACTACTGTTAGCATAGGTGTACTGGTTGCCCGGTTCTTCAAGCC
AGTTTGGTCAAAAGCTTTCTTGCTTGGTGAAGCAGCTTGGTTTCAGGTGCATCGGATGCTCATGTTCACC
ACAACTGTCCTCACCTGCATTGCTTTTGTTATGCCGTTTATATACAGGGGAGGCTGGAGTAGGCATGCAG
GTTACCACCCATACCTCGGCTGTATAGTGATGACTTTGGCAGTTCTTCAGCCTCTTCTGGCAGTCTTCAG
GCCACCTTTACATGACCCAAGAAGGCAAATGTTTAACTGGACTCATTGGAGTATGGGAACAGCTGCTAGA
ATAATAGCAGTGGCAGCGATGTTCCTGGGAATGGATTTACCAGGACTGAATCTTCCTGATTCATGGAAAA
CCTATGCAATGACCGGATTCGTAGCCTGGCATGTTGGGACTGAGGTTGTTCTGGAGTTGAAATATTGGAT
GATGACAGAATTCAGATCCTTCAGTCATTTACTGCAGTGGAAACAGAGGGTCATGCTTTTAAAAAGGCAG
TGTTGGCAATTTATGTCTGTGGGAATGTTACTTTTCTCATCATATTTTTATCTGCAATCAACCATCTATG
AGCAAGCAAAGACCTTGGCTTTTGCAGGCCAAGTGATAATTATCATCAAACCAAAGAAACTTGAAGCCTG
TCCTGACTGCCTGGAGCATATTTGTGAATTCTCACTTGGAAGACTGGGGTCATGTCTGTAG

Translation (626 aa):
MAVSGFTLGTCILLLHISYVANYPNGKVTQSCHGMIPEHGHSPQSVPVHDIYVSQMTFRPGDQIEVTLSG
HPFKGFLLEARNAEDLNGPPIGSFTLIDSEVSQLLTCEDIQGSAVSHRSASKKTEIKVYWNAPSSAPNHT
QFLVTVVEKYKIYWVKIPGPIISQPNAFPFTTPKATVVPLPTLPPVSHLTKPFSASDCGNKKFCIRSPLN
CDPEKEASCVFLSFTRDDQSVMVEMSGPSKGYLSFALSHDQWMGDDDAYLCIHEDQTVYIQPSHLTGRSH
PVMDSRDTLEDMAWRLADGVMQCSFRRNITLPGVKNRFDLNTSYYIFLADGAANDGRIYKHSQQPLITYE
KYDVTDSPKNIGGSHSVLLLKVHGALMFVAWMTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMFT
TTVLTCIAFVMPFIYRGGWSRHAGYHPYLGCIVMTLAVLQPLLAVFRPPLHDPRRQMFNWTHWSMGTAAR
IIAVAAMFLGMDLPGLNLPDSWKTYAMTGFVAWHVGTEVVLELKYWMMTEFRSFSHLLQWKQRVMLLKRQ
CWQFMSVGMLLFSSYFYLQSTIYEQAKTLAFAGQVIIIIKPKKLEACPDCLEHICEFSLGRLGSCL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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