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Report for CCDS45344.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45344.1 Public Homo sapiens 15 DET1 24 110 108 CCDS HistoryNCBI Gene:55070Re-query CCDS DB by CCDS ID:45344.1Re-query CCDS DB by GeneID:55070See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45344.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268148.13 ENSP00000268148.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268148.13Link to Ensembl Protein Viewer:ENSP00000268148.8Re-query CCDS DB by Nucleotide ID:ENST00000268148Re-query CCDS DB by Protein ID:ENSP00000268148
Original member Current member EBI ENST00000649547.1 ENSP00000497509.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649547.1Link to Ensembl Protein Viewer:ENSP00000497509.1Re-query CCDS DB by Nucleotide ID:ENST00000649547Re-query CCDS DB by Protein ID:ENSP00000497509
Original member Current member NCBI NM_001144074.3 NP_001137546.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001144074.3Link to Protein Sequence:NP_001137546.1Re-query CCDS DB by Nucleotide ID:NM_001144074Re-query CCDS DB by Protein ID:NP_001137546Link to BLAST:NP_001137546.1
Original member Current member NCBI NM_001321596.1 NP_001308525.1 Accepted alive Link to Nucleotide Sequence:NM_001321596.1Link to Protein Sequence:NP_001308525.1Re-query CCDS DB by Nucleotide ID:NM_001321596Re-query CCDS DB by Protein ID:NP_001308525Link to BLAST:NP_001308525.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137546.1 550 Q7L5Y6-1 550 100% 0 0
NP_001308525.1 550 Q7L5Y6-1 550 100% 0 0

Chromosomal Locations for CCDS 45344.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 88512951 88513140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88516782 88516973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88527599 88527786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88530623 88531705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1653 nt):
ATGGATCATCATGTTTCTACCATCAAGCCTCGAAGAATCCAAAACCAAAATGTCATTCACCGCTTGGAAC
GCCGGCGGATCAGTTCAGGCAAGGCAGGTACCCACTGGCACCAAGTCCGAGTGTTCCATCAGAATGTCTT
CCCCAACTTCACAGTTGTCAACGTTGAAAAGCCTCCTTGTTTCTTGCGTAAATTCTCACCTGATGGACGC
TACTTTATTGCTTTTTCTTCAGACCAGACATCTCTTGAAATCTATGAGTACCAGGGCTGCCAGGCAGCAG
AGGACCTACTGCAGGGATACGAAGGAGAAATCCTGTCCAATGGCAATGACCAGCGGTCAGTGAATATCCG
GGGCCGGCTCTTTGAACGCTTTTTTGTCCTGCTGCACATTACCAATGTTGCGGCCAATGGTGAGCACCTG
AACCGGGAGTGTAGTCTCTTCACTGATGACTGCCGCTGTGTCATCGTGGGCTCAGCTGCCTACCTCCCAG
ATGAGCCTCACCCTCCATTTTTTGAGGTATATCGGAACAGTGAATCAGTGACCCCCAACCCACGGTCCCC
TCTAGAAGACTATTCCCTCCATATCATTGACCTTCACACCGGCCGCTTATGTGATACACGCACGTTCAAG
TGTGACAAGGTGGTCTTGTCACACAACCAAGGGCTGTACTTGTACAAAAACATCCTGGCCATCTTGTCTG
TGCAACAACAGACCATCCATGTCTTCCAGGTGACTCCTGAAGGCACTTTCATTGATGTGCGGACCATTGG
CCGCTTTTGCTATGAGGATGACCTGCTCACTGTGTCAGCTGTTTTCCCTGAGGTACAGCGGGACAGTCAG
ACAGGCATGGCCAATCCCTTTAGGGATCCTTTCATCAATTCCCTCAAACACCGGTTGCTGGTATATTTGT
GGCGCCGGGCAGAACAGGATGGTAGTGCAATGGCCAAGAGGCGCTTCTTCCAGTATTTTGACCAACTGCG
GCAGCTGCGAATGTGGAAAATGCAGCTTCTGGATGAAAACCACCTGTTTATCAAGTACACTAGTGAGGAT
GTAGTAACACTGCGAGTCACAGATCCATCACAGGCATCTTTCTTTGTGGTGTACAATATGGTGACGACAG
AGGTGATTGCTGTGTTTGAGAATACATCAGATGAGCTTTTGGAGCTCTTTGAGAACTTCTGTGACCTTTT
TCGTAATGCTACCCTGCACAGTGAAGTTCAGTTTCCCTGCTCAGCTTCTAGCAACAATTTTGCAAGGCAG
ATCCAGCGCCGGTTCAAAGACACTATTATAAATGCCAAGTATGGAGGGCACACAGAGGCAGTACGCCGGC
TGCTGGGTCAGCTCCCCATCAGTGCTCAGTCTTACAGCGGTAGCCCCTATCTGGATTTGTCTCTCTTCAG
TTATGATGACAAGTGGGTATCTGTCATGGAGCGGCCCAAGACTTGTGGAGATCACCCAATCAGGTTCTAT
GCCCGGGACTCGGGCCTGCTCAAGTTTGAGATCCAGGCGGGGTTATTGGGCCGCCCCATCAACCACACAG
TGCGACGCCTTGTTGCCTTCACCTTTCACCCTTTTGAGCCTTTCGCTATTTCTGTGCAGAGGACTAATGC
TGAGTATGTTGTCAACTTCCATATGCGACACTGCTGCACGTAG

Translation (550 aa):
MDHHVSTIKPRRIQNQNVIHRLERRRISSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFSPDGR
YFIAFSSDQTSLEIYEYQGCQAAEDLLQGYEGEILSNGNDQRSVNIRGRLFERFFVLLHITNVAANGEHL
NRECSLFTDDCRCVIVGSAAYLPDEPHPPFFEVYRNSESVTPNPRSPLEDYSLHIIDLHTGRLCDTRTFK
CDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGTFIDVRTIGRFCYEDDLLTVSAVFPEVQRDSQ
TGMANPFRDPFINSLKHRLLVYLWRRAEQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSED
VVTLRVTDPSQASFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHSEVQFPCSASSNNFARQ
IQRRFKDTIINAKYGGHTEAVRRLLGQLPISAQSYSGSPYLDLSLFSYDDKWVSVMERPKTCGDHPIRFY
ARDSGLLKFEIQAGLLGRPINHTVRRLVAFTFHPFEPFAISVQRTNAEYVVNFHMRHCCT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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