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Report for CCDS14768.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14768.1 Public Homo sapiens X TMLHE 24 110 108 CCDS HistoryNCBI Gene:55217Re-query CCDS DB by CCDS ID:14768.1Re-query CCDS DB by GeneID:55217See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14768.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334398.8 ENSP00000335261.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334398.8Link to Ensembl Protein Viewer:ENSP00000335261.3Re-query CCDS DB by Nucleotide ID:ENST00000334398Re-query CCDS DB by Protein ID:ENSP00000335261
Original member Current member NCBI NM_018196.4 NP_060666.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018196.4Link to Protein Sequence:NP_060666.1Re-query CCDS DB by Nucleotide ID:NM_018196Re-query CCDS DB by Protein ID:NP_060666Link to BLAST:NP_060666.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060666.1 421 Q9NVH6-1 421 100% 0 0

Chromosomal Locations for CCDS 14768.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 155491535 155491666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155492357 155492495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155506898 155507134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155511673 155511792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155513986 155514265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155524456 155524632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155545096 155545276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1266 nt):
ATGTGGTACCACAGATTGTCCCACCTACACAGCAGGCTTCAGGACTTGCTGAAGGGAGGAGTCATATATC
CGGCCCTTCCACAGCCCAACTTCAAAAGCTTACTTCCTTTAGCTGTCCATTGGCACCATACAGCCTCCAA
GTCTCTGACTTGTGCTTGGCAGCAACATGAAGATCATTTTGAGCTGAAATATGCTAATACCGTGATGCGC
TTTGATTACGTCTGGCTTCGAGACCACTGCCGCTCAGCATCGTGCTACAACTCTAAGACTCACCAGCGCA
GCCTGGATACTGCCAGTGTGGATTTATGTATCAAGCCAAAGACCATTCGTCTGGATGAGACCACACTCTT
TTTCACTTGGCCAGATGGTCATGTGACTAAATATGATTTGAATTGGCTGGTGAAAAACAGCTATGAAGGG
CAGAAACAAAAAGTCATCCAGCCTAGAATACTATGGAATGCTGAAATCTACCAGCAAGCCCAAGTTCCAT
CGGTAGATTGCCAGAGCTTCTTAGAAACCAACGAGGGACTGAAGAAGTTTCTGCAAAACTTTCTGCTCTA
TGGAATTGCATTCGTAGAAAATGTCCCTCCCACTCAAGAGCACACAGAGAAGTTGGCAGAAAGGATCAGC
TTAATCAGAGAAACCATTTATGGGAGGATGTGGTATTTCACTTCAGACTTCTCCAGAGGTGACACTGCGT
ACACCAAGCTAGCTCTGGATCGGCACACTGACACTACCTATTTTCAAGAGCCCTGTGGCATTCAAGTGTT
TCATTGTCTTAAACATGAAGGAACTGGTGGCAGGACACTGCTAGTAGATGGATTCTATGCAGCAGAACAG
GTACTTCAAAAGGCACCTGAGGAATTTGAACTCCTCAGTAAAGTGCCATTGAAGCATGAATATATTGAAG
ATGTTGGAGAATGTCACAACCACATGATTGGGATTGGGCCAGTCTTAAATATCTACCCATGGAATAAAGA
GCTGTATTTGATCAGGTACAACAACTATGACCGGGCTGTCATCAATACCGTTCCTTATGATGTCGTCCAT
CGCTGGTATACAGCACACCGGACTCTAACGATAGAGTTGAGGAGACCTGAGAATGAGTTTTGGGTCAAAC
TAAAGCCTGGCAGGGTCCTATTTATAGACAACTGGCGTGTCCTACATGGCAGGGAATGCTTCACTGGCTA
CCGCCAACTGTGTGGCTGCTATTTAACAAGAGATGATGTATTAAACACTGCTCGCCTCTTGGGGCTTCAG
GCTTAA

Translation (421 aa):
MWYHRLSHLHSRLQDLLKGGVIYPALPQPNFKSLLPLAVHWHHTASKSLTCAWQQHEDHFELKYANTVMR
FDYVWLRDHCRSASCYNSKTHQRSLDTASVDLCIKPKTIRLDETTLFFTWPDGHVTKYDLNWLVKNSYEG
QKQKVIQPRILWNAEIYQQAQVPSVDCQSFLETNEGLKKFLQNFLLYGIAFVENVPPTQEHTEKLAERIS
LIRETIYGRMWYFTSDFSRGDTAYTKLALDRHTDTTYFQEPCGIQVFHCLKHEGTGGRTLLVDGFYAAEQ
VLQKAPEEFELLSKVPLKHEYIEDVGECHNHMIGIGPVLNIYPWNKELYLIRYNNYDRAVINTVPYDVVH
RWYTAHRTLTIELRRPENEFWVKLKPGRVLFIDNWRVLHGRECFTGYRQLCGCYLTRDDVLNTARLLGLQ
A


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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