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Report for CCDS35358.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35358.1 Public Homo sapiens X TCEAL1 24 110 108 CCDS HistoryNCBI Gene:9338Re-query CCDS DB by CCDS ID:35358.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35358.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372624.3 ENSP00000361707.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372624.3Link to Ensembl Protein Viewer:ENSP00000361707.3Re-query CCDS DB by Nucleotide ID:ENST00000372624Re-query CCDS DB by Protein ID:ENSP00000361707
Original member Current member EBI ENST00000372625.8 ENSP00000361708.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372625.8Link to Ensembl Protein Viewer:ENSP00000361708.3Re-query CCDS DB by Nucleotide ID:ENST00000372625Re-query CCDS DB by Protein ID:ENSP00000361708
Original member Current member EBI ENST00000372626.7 ENSP00000361709.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372626.7Link to Ensembl Protein Viewer:ENSP00000361709.3Re-query CCDS DB by Nucleotide ID:ENST00000372626Re-query CCDS DB by Protein ID:ENSP00000361709
Original member Current member NCBI NM_001006639.2 NP_001006640.1 Accepted alive Link to Nucleotide Sequence:NM_001006639.2Link to Protein Sequence:NP_001006640.1Re-query CCDS DB by Nucleotide ID:NM_001006639Re-query CCDS DB by Protein ID:NP_001006640Link to BLAST:NP_001006640.1
Original member Current member NCBI NM_001006640.2 NP_001006641.1 Accepted alive Link to Nucleotide Sequence:NM_001006640.2Link to Protein Sequence:NP_001006641.1Re-query CCDS DB by Nucleotide ID:NM_001006640Re-query CCDS DB by Protein ID:NP_001006641Link to BLAST:NP_001006641.1
Original member Current member NCBI NM_004780.3 NP_004771.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004780.3Link to Protein Sequence:NP_004771.2Re-query CCDS DB by Nucleotide ID:NM_004780Re-query CCDS DB by Protein ID:NP_004771Link to BLAST:NP_004771.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001006640.1 159 Q15170 159 100% 0 0
NP_001006641.1 159 Q15170 159 100% 0 0
NP_004771.2 159 Q15170 159 100% 0 0

Chromosomal Locations for CCDS 35358.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 103629917 103630396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (480 nt):
ATGGACAAACCACGCAAAGAAAATGAAGAAGAGCCGCAGAGCGCGCCCAAGACCGATGAGGAGAGGCCTC
CGGTGGAGCACTCTCCCGAAAAGCAGTCCCCCGAGGAGCAGTCTTCGGAGGAGCAGTCCTCGGAGGAGGA
GTTCTTTCCTGAGGAGCTCTTGCCTGAGCTCCTGCCTGAGATGCTCCTCTCGGAGGAGCGCCCTCCGCAG
GAGGGTCTTTCCAGGAAGGACCTGTTTGAGGGGCGCCCTCCCATGGAGCAGCCTCCTTGTGGAGTAGGAA
AACATAAGCTTGAAGAAGGAAGCTTTAAAGAAAGGTTGGCTCGTTCTCGCCCGCAATTTAGAGGGGACAT
ACATGGCAGAAATTTAAGCAATGAGGAGATGATACAGGCAGCAGATGAGCTAGAAGAGATGAAAAGAGTA
AGAAACAAACTGATGATAATGCACTGGAAGGCAAAACGGAGCCGTCCTTATCCTATTTAA

Translation (159 aa):
MDKPRKENEEEPQSAPKTDEERPPVEHSPEKQSPEEQSSEEQSSEEEFFPEELLPELLPEMLLSEERPPQ
EGLSRKDLFEGRPPMEQPPCGVGKHKLEEGSFKERLARSRPQFRGDIHGRNLSNEEMIQAADELEEMKRV
RNKLMIMHWKAKRSRPYPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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