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Report for CCDS47944.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47944.1 Public Homo sapiens 8 ZNF251 24 110 108 CCDS HistoryNCBI Gene:90987Re-query CCDS DB by CCDS ID:47944.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47944.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292562.12 ENSP00000292562.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292562.12Link to Ensembl Protein Viewer:ENSP00000292562.7Re-query CCDS DB by Nucleotide ID:ENST00000292562Re-query CCDS DB by Protein ID:ENSP00000292562
Original member Current member NCBI NM_138367.2 NP_612376.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138367.2Link to Protein Sequence:NP_612376.1Re-query CCDS DB by Nucleotide ID:NM_138367Re-query CCDS DB by Protein ID:NP_612376Link to BLAST:NP_612376.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612376.1 671 Q9BRH9 671 100% 0 0

Chromosomal Locations for CCDS 47944.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 144721644 144723382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144753683 144753796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144754192 144754321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144754696 144754728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2016 nt):
ATGGCAGCCACATTCCAGCTTCCAGGGCACCAGGAGATGCCGCTGACCTTCCAGGATGTGGCCGTGTACT
TCTCTCAGGCGGAGGGGCGGCAGCTGGGCCCCCAGCAGCGGGCGCTCTACCGGGATGTGATGCTGGAGAA
CTATGGGAACGTGGCCTCTCTGGGATTCCCTGTCCCTAAGCCGGAGTTGATCTCCCAGCTGGAGCAGGGG
AAGGAACTTTGGGTCCTGAATCTTCTGGGAGCTGAGGAACCAGATATCTTGAAAAGCTGCCAGAAAGATT
CTGAGGTTGGGACCAAGAAGGAACTATCTATTTTAAACCAAAAATTTTCCGAAGAAGTAAAAACCCCAGA
ATTTGTATCAAGAAGACTCTTAAGGGATAATGCACAGGCCGCTGAGTTTCGGGAAGCATGGGGCCGTGAG
GGCAAACTCAAAGAGCGCGTGGGAAATTCTGCCGGGCAGAGTTTGAACAAACCCAATATTCACAAGAGAG
TTTTAACAGAAGCTACCGTGGGCAGGGAAAGATCTTTGGGAGAAAGAACCCAAGAGTGTAGTGCATTTGA
TAGAAACTTGAATCTGGACCAAAATGTTGTTAGACTTCAAAGAAATAAAACAGGAGAGAGGGTCTTTAAA
TGTGATATATGCAGCAAAACCTTCAAATATAATTCAGACCTAAGTAGACACCAGAGAAGTCACACTGGGG
AGAAGCCGTACGAATGTGGCCGGTGTGGGCGAGCCTTTACTCACAGCTCAAATCTTGTTCTGCACCATCA
CATTCACACTGGAAATAAACCATTTAAATGTGATGAATGTGGGAAAACTTTTGGACTCAATTCTCACCTC
CGTCTTCATCGGAGAATTCACACTGGAGAAAAACCCTTTGGCTGTGGTGAGTGTGGGAAGGCTTTCAGTC
GAAGCTCAACTCTTATTCAACATCGGATCATTCACACAGGAGAGAAACCCTACAAGTGTAATGAATGTGG
AAGAGGCTTTAGCCAGAGCCCCCAGTTAACTCAGCATCAGAGAATTCACACTGGAGAGAAGCCGCATGAA
TGCAGTCACTGTGGGAAGGCCTTCAGTCGAAGCTCCAGCCTTATTCAGCATGAGAGAATTCACACTGGAG
AGAAGCCCCATAAATGCAATCAGTGTGGGAAGGCCTTCAGTCAGAGCTCAAGCCTTTTCCTCCATCATCG
GGTTCATACTGGAGAGAAACCCTATGTATGTAATGAATGCGGCAGAGCCTTTGGTTTTAACTCTCATCTT
ACTGAACACGTAAGGATTCACACAGGAGAAAAACCCTATGTTTGTAATGAGTGCGGCAAAGCCTTTCGTC
GGAGTTCCACTCTTGTTCAGCATCGAAGAGTTCACACTGGGGAGAAGCCCTACCAGTGCGTTGAATGTGG
GAAAGCTTTCAGCCAGAGCTCCCAGCTCACCCTACATCAGCGAGTTCACACTGGAGAGAAGCCCTATGAC
TGTGGTGACTGTGGGAAGGCCTTCAGCCGGAGGTCAACCCTCATTCAGCATCAGAAAGTTCACAGCGGAG
AGACTCGTAAGTGCAGAAAACATGGTCCAGCCTTTGTTCATGGCTCCAGCCTCACAGCAGATGGACAGAT
TCCCACTGGAGAGAAGCACGGCAGAGCCTTTAACCATGGTGCAAATCTCATTCTGCGCTGGACAGTTCAC
ACTGGTGAGAAATCCTTTGGATGTAATGAATATGGAAAAGCTTTCAGTCCCACCTCACGACCCACTGAAG
ATCAGATAATGCATGCTGGGGAAAAGCCCTATAAATGTCAAGAATGTGGAAACGCCTTCAGTGGAAAGTC
AACCCTTATTCAACATCAGGTAACTCACACTGGTCAGAAACCATGTCATTGCAGTGTGTATGGGAAAGCC
TTCAGCCAGAGTTCACAGCTCACACCACCTCAGCAGACTCGTGTTGGAGAGAAACCTGCTTTAAATGATG
GCTCTAAAAGATACTTTATTCATATCAAGAAGATTTTCCAAGAAAGACATTTTTAA

Translation (671 aa):
MAATFQLPGHQEMPLTFQDVAVYFSQAEGRQLGPQQRALYRDVMLENYGNVASLGFPVPKPELISQLEQG
KELWVLNLLGAEEPDILKSCQKDSEVGTKKELSILNQKFSEEVKTPEFVSRRLLRDNAQAAEFREAWGRE
GKLKERVGNSAGQSLNKPNIHKRVLTEATVGRERSLGERTQECSAFDRNLNLDQNVVRLQRNKTGERVFK
CDICSKTFKYNSDLSRHQRSHTGEKPYECGRCGRAFTHSSNLVLHHHIHTGNKPFKCDECGKTFGLNSHL
RLHRRIHTGEKPFGCGECGKAFSRSSTLIQHRIIHTGEKPYKCNECGRGFSQSPQLTQHQRIHTGEKPHE
CSHCGKAFSRSSSLIQHERIHTGEKPHKCNQCGKAFSQSSSLFLHHRVHTGEKPYVCNECGRAFGFNSHL
TEHVRIHTGEKPYVCNECGKAFRRSSTLVQHRRVHTGEKPYQCVECGKAFSQSSQLTLHQRVHTGEKPYD
CGDCGKAFSRRSTLIQHQKVHSGETRKCRKHGPAFVHGSSLTADGQIPTGEKHGRAFNHGANLILRWTVH
TGEKSFGCNEYGKAFSPTSRPTEDQIMHAGEKPYKCQECGNAFSGKSTLIQHQVTHTGQKPCHCSVYGKA
FSQSSQLTPPQQTRVGEKPALNDGSKRYFIHIKKIFQERHF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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