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Report for CCDS141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
141.1 Public Homo sapiens 1 KIAA2013 24 110 108 CCDS HistoryNCBI Gene:90231Re-query CCDS DB by CCDS ID:141.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 141.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376572.8 ENSP00000365756.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376572.8Link to Ensembl Protein Viewer:ENSP00000365756.3Re-query CCDS DB by Nucleotide ID:ENST00000376572Re-query CCDS DB by Protein ID:ENSP00000365756
Original member Current member EBI ENST00000616327.1 ENSP00000480577.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616327.1Link to Ensembl Protein Viewer:ENSP00000480577.1Re-query CCDS DB by Nucleotide ID:ENST00000616327Re-query CCDS DB by Protein ID:ENSP00000480577
Original member Current member NCBI NM_138346.3 NP_612355.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138346.3Link to Protein Sequence:NP_612355.1Re-query CCDS DB by Nucleotide ID:NM_138346Re-query CCDS DB by Protein ID:NP_612355Link to BLAST:NP_612355.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612355.1 634 Q8IYS2-1 634 100% 0 0

Chromosomal Locations for CCDS 141.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 11920315 11920332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11922636 11923489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11925205 11926237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1905 nt):
ATGTGGCTGCAGCAGCGGCTCAAGGGGCTGCCGGGACTGCTGTCGAGCAGCTGGGCCCGCCGCCTCCTCT
GCCTGCTTGGCCTCCTGCTGCTGCTTCTGTGGTTTGGGGGGTCCGGCGCGCGGCGGGCGGCGGGCGGCCT
GCACCTGCTGCCCTGGTCCCGCGGTGAGCCGGGCGCCGCCGAGCCGTCTGCCTGCCTGGAGGCGGCCACC
CGCGCCTGGCGCGGCCTGCGGGAGCGCGGTGAGGTGGTACCGCTGGGTCCTGGAGTGCCGGCCCTGGTGG
CCAACGGCTTCCTGGCCCTGGACGTGGCTGCCAATCGGCTGTGGGTGACTCCCGGGGAGCGGGAGCCCGC
CGTGGCGCCGGACTTTGTGCCCTTCGTGCAGCTGCGCCCGCTGAGCGCGCTGGCTGAAGCTGGAGAGGCG
GTGCTGCTGCTGCGGGAGGGGCTTCTGCGCCGCGTGCGTTGCCTGCAGCTGGGGTCCCCAGGTCCTGGCC
CCGTGGCCGCCGGCCCCGGGCCCGCCTCCGTCTCTGGCCTTGCCGCGGGGTCCGGCCGCGACTGCGTGCT
GCTGCAAGAGGACTTTCTGGCGCACAGGGGCCGACCCCACGTCTACCTGCAGCGCATCCAGCTCAACAAC
CCCACGGAGCGCGTGGCCGCGCTGCAGACTGTGGGGCCCACTGCCGGCCCAGCCCCCAAGGCCTTCACCA
GTACCCTGGAGAAGGTCGGAGACCATCAGTTCCTCCTCTACTCAGGCCGGTCCCCGCCTACGCCCACTGG
GTTGGTGCACCTGGTGGTGGTGGCCGCCAAGAAGCTGGTGAACCGCCTCCAAGTGGCTCCCAAGACGCAG
CTGGATGAGACGGTGCTGTGGGTGGTGCACGTCTCTGGCCCCATTAACCCCCAGGTGCTCAAAAGCAAAG
CAGCCAAGGAGCTCAAGGCGCTGCAGGACTTGGCACGGAAGGAAATGCTGGAGCTCTTGGACATGCCAGC
GGCGGAGCTGCTTCAAGACCACCAGCTCCTCTGGGCTCAGCTCTTCAGCCCAGGAGTGGAAATGAAGAAG
ATCACTGACACCCACACGCCGTCTGGCCTCACCGTGAACCTGACGCTCTATTACATGCTCTCCTGCTCGC
CAGCCCCACTGCTCAGCCCCTCCCTGAGCCACAGGGAGCGAGACCAGATGGAGTCGACGCTCAACTATGA
AGATCACTGCTTCAGCGGGCACGCCACCATGCACGCCGAGAACCTGTGGCCGGGGCGGCTGTCCTCCGTC
CAGCAGATCCTGCAGCTCTCTGACCTGTGGAGGCTGACCCTCCAGAAGCGTGGCTGCAAGGGGCTGGTGA
AGGTGGGTGCCCCAGGCATCCTGCAGGGGATGGTGCTCAGCTTTGGGGGGCTGCAGTTCACAGAGAACCA
CCTCCAGTTCCAGGCCGACCCCGACGTGCTGCACAACAGCTATGCATTGCATGGCATCCGCTACAAGAAC
GACCATATCAACCTGGCCGTGCTGGCGGATGCCGAGGGCAAGCCCTACCTACACGTGTCCGTGGAGTCCC
GTGGCCAGCCTGTCAAGATCTATGCCTGCAAGGCAGGCTGCCTGGACGAGCCAGTGGAGCTGACCTCGGC
GCCCACGGGCCACACCTTCTCGGTCATGGTGACACAGCCCATCACGCCACTGCTCTACATCTCCACCGAC
CTCACACACCTGCAGGACCTGCGGCACACGCTGCACCTCAAGGCCATCCTGGCCCATGATGAGCACATGG
CCCAGCAGGACCCCGGGCTGCCCTTCCTCTTCTGGTTCAGCGTGGCCTCCCTAATCACCCTCTTCCACCT
CTTCCTCTTCAAGCTCATCTACAACGAGTACTGTGGGCCTGGAGCCAAGCCCCTCTTCAGGAGTAAGGAA
GATCCCAGTGTCTGA

Translation (634 aa):
MWLQQRLKGLPGLLSSSWARRLLCLLGLLLLLLWFGGSGARRAAGGLHLLPWSRGEPGAAEPSACLEAAT
RAWRGLRERGEVVPLGPGVPALVANGFLALDVAANRLWVTPGEREPAVAPDFVPFVQLRPLSALAEAGEA
VLLLREGLLRRVRCLQLGSPGPGPVAAGPGPASVSGLAAGSGRDCVLLQEDFLAHRGRPHVYLQRIQLNN
PTERVAALQTVGPTAGPAPKAFTSTLEKVGDHQFLLYSGRSPPTPTGLVHLVVVAAKKLVNRLQVAPKTQ
LDETVLWVVHVSGPINPQVLKSKAAKELKALQDLARKEMLELLDMPAAELLQDHQLLWAQLFSPGVEMKK
ITDTHTPSGLTVNLTLYYMLSCSPAPLLSPSLSHRERDQMESTLNYEDHCFSGHATMHAENLWPGRLSSV
QQILQLSDLWRLTLQKRGCKGLVKVGAPGILQGMVLSFGGLQFTENHLQFQADPDVLHNSYALHGIRYKN
DHINLAVLADAEGKPYLHVSVESRGQPVKIYACKAGCLDEPVELTSAPTGHTFSVMVTQPITPLLYISTD
LTHLQDLRHTLHLKAILAHDEHMAQQDPGLPFLFWFSVASLITLFHLFLFKLIYNEYCGPGAKPLFRSKE
DPSV


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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