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Report for CCDS9616.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9616.1 Public Homo sapiens 14 IPO4 24 110 108 CCDS HistoryNCBI Gene:79711Re-query CCDS DB by CCDS ID:9616.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9616.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354464.11 ENSP00000346453.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354464.11Link to Ensembl Protein Viewer:ENSP00000346453.6Re-query CCDS DB by Nucleotide ID:ENST00000354464Re-query CCDS DB by Protein ID:ENSP00000346453
Original member Current member NCBI NM_024658.4 NP_078934.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024658.4Link to Protein Sequence:NP_078934.3Re-query CCDS DB by Nucleotide ID:NM_024658Re-query CCDS DB by Protein ID:NP_078934Link to BLAST:NP_078934.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078934.3 1081 Q8TEX9-1 1081 100% 0 0

Chromosomal Locations for CCDS 9616.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24180442 24180572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24180689 24180758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24181513 24181617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24181711 24181843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24181955 24182163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24182278 24182403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24182792 24182842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24182976 24183169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24183250 24183355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24183456 24183513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24183590 24183667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24183783 24183898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24183998 24184109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24184298 24184418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24184650 24184763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24184867 24184980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24185183 24185312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24185459 24185567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24185861 24185970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24186129 24186182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24186287 24186451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24186708 24186791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24186878 24186979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24187085 24187150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24187400 24187579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24187667 24187796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24188216 24188257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24188344 24188423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24188552 24188638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24188719 24188787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3246 nt):
ATGGAGTCAGCCGGGCTAGAGCAGCTCCTACGGGAGCTGCTGCTACCGGACACCGAGCGCATCCGTCGGG
CCACGGAACAGCTCCAGATCGTTCTTCGGGCCCCCGCCGCTTTGCCGGCTCTCTGCGACCTGCTAGCCTC
GGCGGCCGACCCCCAGATCCGCCAGTTTGCGGCCGTGCTGACCCGCAGACGACTGAACACCCGCTGGCGA
CGGCTGGCGGCGGAGCAACGGGAGAGCCTCAAGTCCCTGATCCTGACGGCCCTGCAGAGAGAAACAGAGC
ACTGTGTGAGCCTCAGCCTGGCCCAGCTCTCAGCCACCATTTTTCGAAAGGAAGGCTTGGAGGCCTGGCC
ACAGCTTTTGCAGCTGCTTCAGCACAGTACCCACAGCCCCCACAGCCCAGAGAGAGAGATGGGGCTTTTG
CTGCTAAGTGTGGTGGTGACCTCCCGGCCCGAGGCCTTCCAACCCCACCACCGGGAGCTTCTTCGGCTTC
TGAATGAGACTCTTGGTGAGGTGGGCTCTCCTGGGCTGCTCTTCTACTCCCTGCGCACTCTGACCACCAT
GGCTCCCTACCTCAGCACTGAAGATGTGCCTCTCGCTCGGATGTTGGTGCCCAAGCTGATCATGGCCATG
CAGACTCTGATCCCCATAGATGAGGCAAAGGCCTGTGAGGCCCTTGAGGCTTTGGATGAACTGTTGGAGT
CAGAGGTGCCGGTCATCACCCCCTACCTCTCTGAAGTCCTCACATTCTGCCTGGAGGTAGCTAGAAATGT
GGCCCTGGGCAATGCGATACGCATACGTATTCTCTGCTGCCTCACTTTCTTGGTCAAAGTCAAGAGCAAG
GCCTTACTGAAGAATCGTCTCCTGCCACCCTTGCTGCACACCCTTTTCCCCATTGTGGCTGCTGAGCCCC
CACCAGGCCAGTTGGATCCCGAGGACCAGGATTCAGAAGAGGAAGAGTTGGAGATTGAGCTGATGGGGGA
GACTCCCAAGCATTTCGCTGTACAAGTTGTGGACATGCTGGCACTACACCTGCCCCCCGAGAAGCTCTGT
CCCCAGCTGATGCCCATGTTGGAAGAGGCTTTGCGGAGCGAGAGCCCATACCAGCGCAAAGCTGGACTCC
TGGTGCTGGCCGTGCTGTCTGACGGAGCTGGCGACCACATCAGGCAGAGACTGCTGCCCCCACTGCTGCA
GATTGTGTGCAAGGGCCTGGAGGACCCCTCGCAAGTTGTACGCAATGCTGCGCTGTTTGCCCTGGGCCAG
TTCTCAGAAAACCTACAGCCCCATATCAGCAGCTATTCAAGGGAGGTAATGCCACTGCTCCTCGCCTACT
TGAAGTCGGTGCCTCTTGGACACACACACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGA
GAACCTAGGGCCCAAGGTGCAGCCCTACCTTCCGGAGCTTATGGAATGCATGCTGCAGCTTCTGAGGAAC
CCCAGCAGTCCCCGGGCCAAGGAGCTGGCTGTGAGCGCCCTGGGAGCCATTGCTACGGCTGCCCAGGCCT
CGCTGCTGCCCTACTTCCCTGCCATCATGGAGCACCTGCGGGAATTCCTGTTAACAGGCCGTGAGGACCT
TCAGCCTGTGCAGATCCAGAGCCTGGAGACACTGGGGGTGCTGGCACGAGCAGTGGGGGAGCCCATGAGG
CCGCTGGCTGAGGAATGCTGCCAGCTGGGTCTGGGCCTCTGCGACCAGGTAGACGACCCTGACTTGCGGC
GCTGCACGTACAGCCTATTTGCAGCCTTATCGGGTCTGATGGGTGAGGGCCTGGCGCCCCACTTGGAACA
GATCACCACGCTCATGCTGCTGTCACTGCGTTCCACCGAGGGCATTGTGCCTCAGTATGACGGGAGCAGC
TCCTTCCTTCTGTTTGACGATGAGAGTGATGGGGAAGAAGAGGAGGAGCTCATGGATGAGGATGTGGAAG
AAGAGGATGACTCAGAGATCTCAGGGTACAGCGTGGAGAATGCCTTCTTCGATGAGAAGGAAGACACCTG
TGCTGCCGTGGGGGAGATCTCTGTGAACACCAGTGTGGCCTTCCTTCCATACATGGAAAGTGTCTTTGAA
GAAGTATTTAAACTGCTGGAGTGCCCTCACCTGAATGTGCGGAAGGCAGCCCATGAGGCTCTGGGTCAGT
TTTGCTGTGCACTGCACAAGGCCTGTCAAAGCTGCCCCTCGGAACCCAACACTGCTGCTTTGCAGGCTGC
CCTGGCCCGAGTCGTGCCATCCTACATGCAGGCAGTGAACAGGGAGCGGGAACGCCAGGTGGTGATGGCC
GTGCTGGAGGCCCTGACAGGGGTGCTCCGCAGCTGTGGGACCCTCACACTGAAGCCCCCTGGGCGCCTCG
CTGAGCTCTGTGGCGTGCTCAAGGCTGTGCTGCAGAGGAAGACAGCCTGTCAGGATACTGACGAGGAGGA
GGAAGAGGAAGATGATGATCAGGCTGAATACGACGCCATGTTGCTGGAGCACGCTGGAGAGGCCATCCCT
GCCCTGGCAGCCGCGGCTGGGGGAGACTCCTTTGCCCCATTCTTTGCCGGTTTCCTGCCATTATTGGTGT
GCAAGACAAAACAGGGCTGCACAGTGGCAGAGAAGTCCTTTGCAGTGGGGACCTTGGCAGAGACTATTCA
GGGCCTGGGTGCTGCCTCAGCCCAGTTTGTGTCTCGGCTGCTCCCTGTGCTGTTGAGCACCGCCCAAGAG
GCAGACCCCGAGGTGCGAAGCAATGCCATCTTCGGGATGGGCGTGCTGGCAGAGCATGGGGGCCACCCTG
CCCAGGAACACTTCCCCAAGCTGCTGGGGCTCCTTTTTCCCCTCCTGGCGCGGGAGCGACATGATCGTGT
CCGTGACAACATCTGTGGGGCACTTGCCCGCCTGTTGATGGCCAGTCCCACCAGGAAACCAGAGCCCCAG
GTGCTGGCTGCCCTACTGCATGCCCTGCCACTGAAGGAGGACTTGGAGGAGTGGGTCACCATTGGGCGCC
TCTTCAGCTTCCTGTACCAGAGCAGCCCTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTG
CAGCCTCATTCTGGCTGACAACAAGATCCCACCAGACACCAAGGCCGCACTGTTGCTGCTCCTGACGTTC
CTGGCCAAACAGCACACCGACAGCTTTCAAGCAGCTCTGGGCTCACTGCCTGTTGACAAGGCTCAGGAGC
TCCAGGCTGTACTGGGCCTCTCCTAG

Translation (1081 aa):
MESAGLEQLLRELLLPDTERIRRATEQLQIVLRAPAALPALCDLLASAADPQIRQFAAVLTRRRLNTRWR
RLAAEQRESLKSLILTALQRETEHCVSLSLAQLSATIFRKEGLEAWPQLLQLLQHSTHSPHSPEREMGLL
LLSVVVTSRPEAFQPHHRELLRLLNETLGEVGSPGLLFYSLRTLTTMAPYLSTEDVPLARMLVPKLIMAM
QTLIPIDEAKACEALEALDELLESEVPVITPYLSEVLTFCLEVARNVALGNAIRIRILCCLTFLVKVKSK
ALLKNRLLPPLLHTLFPIVAAEPPPGQLDPEDQDSEEEELEIELMGETPKHFAVQVVDMLALHLPPEKLC
PQLMPMLEEALRSESPYQRKAGLLVLAVLSDGAGDHIRQRLLPPLLQIVCKGLEDPSQVVRNAALFALGQ
FSENLQPHISSYSREVMPLLLAYLKSVPLGHTHHLAKACYALENFVENLGPKVQPYLPELMECMLQLLRN
PSSPRAKELAVSALGAIATAAQASLLPYFPAIMEHLREFLLTGREDLQPVQIQSLETLGVLARAVGEPMR
PLAEECCQLGLGLCDQVDDPDLRRCTYSLFAALSGLMGEGLAPHLEQITTLMLLSLRSTEGIVPQYDGSS
SFLLFDDESDGEEEEELMDEDVEEEDDSEISGYSVENAFFDEKEDTCAAVGEISVNTSVAFLPYMESVFE
EVFKLLECPHLNVRKAAHEALGQFCCALHKACQSCPSEPNTAALQAALARVVPSYMQAVNRERERQVVMA
VLEALTGVLRSCGTLTLKPPGRLAELCGVLKAVLQRKTACQDTDEEEEEEDDDQAEYDAMLLEHAGEAIP
ALAAAAGGDSFAPFFAGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQE
ADPEVRSNAIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARERHDRVRDNICGALARLLMASPTRKPEPQ
VLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVIDVAPELLRICSLILADNKIPPDTKAALLLLLTF
LAKQHTDSFQAALGSLPVDKAQELQAVLGLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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