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Report for CCDS33532.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33532.1 Public Homo sapiens 21 KRTAP27-1 24 110 108 CCDS HistoryNCBI Gene:643812Re-query CCDS DB by CCDS ID:33532.1See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33532.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382835.2 ENSP00000372286.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382835.2Link to Ensembl Protein Viewer:ENSP00000372286.2Re-query CCDS DB by Nucleotide ID:ENST00000382835Re-query CCDS DB by Protein ID:ENSP00000372286
Original member Current member NCBI NM_001077711.1 NP_001071179.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001077711.1Link to Protein Sequence:NP_001071179.1Re-query CCDS DB by Nucleotide ID:NM_001077711Re-query CCDS DB by Protein ID:NP_001071179Link to BLAST:NP_001071179.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001071179.1 207 Q3LI81 207 100% 0 0

Chromosomal Locations for CCDS 33532.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 30337045 30337668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGCCTCATAGCCACTGCCATTCACTCAGGAGCTTCCACAATGCCCCACCACTCTCTGCCATCACACATG
GCACTAATCCTATAACCTTTGAAGACAGATTGTGTTTGCCCAGCAGCTTCCATAGCAGAACCTGTTTCCT
GGACAACTTTCAAGAAACCTGCAATGAAACCACCAGCTGCCAAATGACCAATTGTGAACAGGACTTATTC
ACAGACGATAGCTGTGTGCAAAGTAACTGCTTCCCCGGAGTTGTCCAAACTACTTACTCCAATTCCAGGC
CCTGCGAAAGGACAGCGTGCCAATCAGAAAGTTCTTCAGCAGGGCTGGCTTGTGTTTCTCAGCCTTGCCA
ATCAGAAAGCACTCAGCAGATGGGTTTTGTAGCCCAGAGCTGCCAACCTGCAAGCCTCAAGGGAAACAGT
TGCCCACCCAAGACTTCTAAGTCTAAAAATTTCGAAACTCTGGAACGTGCATCTAGCCAATGTCAGTGTC
AGTCTCAGAACCCTGAATCCAGTTCCTGTAGACCTCTGGTCAATGTTGCACCTGAGCCACAACTCCTGGA
ATCTTCTCCAGGAGTTGAACCAACTTGCTGTGTTACTGGTGGTTCTCAATTGCCTAGTAAGTGA

Translation (207 aa):
MPHSHCHSLRSFHNAPPLSAITHGTNPITFEDRLCLPSSFHSRTCFLDNFQETCNETTSCQMTNCEQDLF
TDDSCVQSNCFPGVVQTTYSNSRPCERTACQSESSSAGLACVSQPCQSESTQQMGFVAQSCQPASLKGNS
CPPKTSKSKNFETLERASSQCQCQSQNPESSSCRPLVNVAPEPQLLESSPGVEPTCCVTGGSQLPSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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