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Report for CCDS9193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9193.1 Public Homo sapiens 12 RPLP0 24 110 108 CCDS HistoryNCBI Gene:6175Re-query CCDS DB by CCDS ID:9193.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9193.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000228306.8 ENSP00000339027.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000228306.8Link to Ensembl Protein Viewer:ENSP00000339027.3Re-query CCDS DB by Nucleotide ID:ENST00000228306Re-query CCDS DB by Protein ID:ENSP00000339027
Original member Current member EBI ENST00000392514.9 ENSP00000376299.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392514.9Link to Ensembl Protein Viewer:ENSP00000376299.4Re-query CCDS DB by Nucleotide ID:ENST00000392514Re-query CCDS DB by Protein ID:ENSP00000376299
Original member Current member EBI ENST00000551150.5 ENSP00000449328.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000551150.5Link to Ensembl Protein Viewer:ENSP00000449328.1Re-query CCDS DB by Nucleotide ID:ENST00000551150Re-query CCDS DB by Protein ID:ENSP00000449328
Original member Current member NCBI NM_001002.4 NP_000993.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001002.4Link to Protein Sequence:NP_000993.1Re-query CCDS DB by Nucleotide ID:NM_001002Re-query CCDS DB by Protein ID:NP_000993Link to BLAST:NP_000993.1
Original member Current member NCBI NM_053275.4 NP_444505.1 Accepted alive Link to Nucleotide Sequence:NM_053275.4Link to Protein Sequence:NP_444505.1Re-query CCDS DB by Nucleotide ID:NM_053275Re-query CCDS DB by Protein ID:NP_444505Link to BLAST:NP_444505.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000993.1 317 P05388-1 317 100% 0 0
NP_444505.1 317 P05388-1 317 100% 0 0

Chromosomal Locations for CCDS 9193.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 120196773 120196934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120197322 120197462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120198554 120198739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120198854 120199000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120199118 120199205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120199310 120199485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120200730 120200783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGCCCAGGGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATCATCCAACTATTGGATGATT
ATCCGAAATGTTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGATCCGCATGTCCCT
TCGCGGGAAGGCTGTGGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGAGGGCACCTGGAA
AACAACCCAGCTCTGGAGAAACTGCTGCCTCATATCCGGGGGAATGTGGGCTTTGTGTTCACCAAGGAGG
ACCTCACTGAGATCAGGGACATGTTGCTGGCCAATAAGGTGCCAGCTGCTGCCCGTGCTGGTGCCATTGC
CCCATGTGAAGTCACTGTGCCAGCCCAGAACACTGGTCTCGGGCCCGAGAAGACCTCCTTTTTCCAGGCT
TTAGGTATCACCACTAAAATCTCCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTGATCAAGACTG
GAGACAAAGTGGGAGCCAGCGAAGCCACGCTGCTGAACATGCTCAACATCTCCCCCTTCTCCTTTGGGCT
GGTCATCCAGCAGGTGTTCGACAATGGCAGCATCTACAACCCTGAAGTGCTTGATATCACAGAGGAAACT
CTGCATTCTCGCTTCCTGGAGGGTGTCCGCAATGTTGCCAGTGTCTGTCTGCAGATTGGCTACCCAACTG
TTGCATCAGTACCCCATTCTATCATCAACGGGTACAAACGAGTCCTGGCCTTGTCTGTGGAGACGGATTA
CACCTTCCCACTTGCTGAAAAGGTCAAGGCCTTCTTGGCTGATCCATCTGCCTTTGTGGCTGCTGCCCCT
GTGGCTGCTGCCACCACAGCTGCTCCTGCTGCTGCTGCAGCCCCAGCTAAGGTTGAAGCCAAGGAAGAGT
CGGAGGAGTCGGACGAGGATATGGGATTTGGTCTCTTTGACTAA

Translation (317 aa):
MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLE
NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQA
LGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEET
LHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAP
VAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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