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Report for CCDS45085.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45085.1 Public Homo sapiens 14 HOMEZ 24 110 108 CCDS HistoryNCBI Gene:57594Re-query CCDS DB by CCDS ID:45085.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45085.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357460.7 ENSP00000350049.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357460.7Link to Ensembl Protein Viewer:ENSP00000350049.4Re-query CCDS DB by Nucleotide ID:ENST00000357460Re-query CCDS DB by Protein ID:ENSP00000350049
Original member Current member NCBI NM_020834.3 NP_065885.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020834.3Link to Protein Sequence:NP_065885.2Re-query CCDS DB by Nucleotide ID:NM_020834Re-query CCDS DB by Protein ID:NP_065885Link to BLAST:NP_065885.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065885.2 550 Q8IX15-1 550 100% 0 0

Chromosomal Locations for CCDS 45085.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 23275575 23277187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 23285913 23285952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1653 nt):
ATGGTGCGAGGCTGGGAGCCGCCGCCCGGGCTGGACTGCGCTATCTCTGAAGGGCACAAATCAGAAGGCA
CCATGCCTCCTAATAAAGAGGCCAGCGGTCTCAGTAGTTCACCAGCGGGGCTCATCTGCCTCCCTCCAAT
CTCTGAGGAGCTACAGCTTGTGTGGACGCAAGCAGCCCAGACCAGTGAGCTAGACAGCAATGAACACCTG
CTCAAAACCTTCAGCTACTTTCCCTATCCCAGCCTAGCAGACATTGCCCTTCTCTGCCTACGTTATGGGT
TGCAGATGGAGAAAGTCAAGACTTGGTTTATGGCCCAGCGCCTCCGCTGTGGTATTAGCTGGTCATCTGA
AGAAATAGAAGAGACTCGAGCCCGAGTAGTCTACCGTCGGGACCAACTCCATTTCAAATCCCTTCTCTCT
TTTACTCATCATGCGGGACGGCCCCCAGAGGAGGTGCCTCCTCCTCCAGTGCCAGCTCCAGAGCAAGTTG
GTATTGGAATAGGTCCTCCAACTCTTAGCAAGCCTACCCAGACGAAAGGATTGAAGGTAGAGCCTGAGGA
GCCCTCTCAGATGCCACCACTGCCACAGAGTCACCAGAAATTAAAGGAGTCCCTGATGACACCTGGCAGT
GGAGCATTCCCCTACCAATCAGATTTTTGGCAACATCTTCAAAGCAGTGGCCTCTCAAAGGAGCAGGCAG
GCAGGGGTCCCAACCAGTCACATGGCATAGGTACTGCTTCCTGGAACCACTCCACAACCGTCCCCCAGCC
ACAAGCTCGGGATAAACCCCCACCAATTGCATTAATTGCCAGTAGTTGTAAGGAGGAGTCAGCATCTAGT
GTTACTCCCTCTTCTTCCTCTACCTCTTCTTCTTTCCAGGTACTGGCTAATGGAGCTACTGCCGCCTCTA
AACCCCTCCAGCCACTAGGCTGTGTCCCACAGTCAGTGTCACCCAGTGAACAGGCATTACCCCCACATCT
GGAACCAGCCTGGCCCCAAGGGCTACGGCATAACTCAGTACCAGGTAGAGTTGGCCCCACAGAGTACCTT
TCCCCAGATATGCAACGCCAGCGAAAGACCAAGCGCAAAACCAAAGAGCAGCTGGCTATCCTTAAATCCT
TTTTTTTACAGTGCCAGTGGGCACGGCGTGAGGATTACCAAAAGTTAGAACAGATCACTGGTTTACCTCG
GCCTGAGATCATTCAGTGGTTTGGTGACACACGCTATGCCTTGAAGCATGGGCAACTAAAGTGGTTTCGG
GACAACGCAGTACCTGGTGCCCCTAGTTTCCAAGACCCAGCAATTCCTACACCACCACCATCAACCCGCT
CCTTGAACGAAAGGGCTGAGACACCACCTCTGCCGATCCCTCCACCCCCACCGGATATACAACCCTTGGA
GAGGTACTGGGCAGCCCACCAACAGCTACGGGAAACTGATATCCCTCAATTGAGTCAGGCATCAAGGCTT
AGCACCCAGCAGGTGCTGGATTGGTTTGACTCTCGATTACCTCAGCCAGCTGAGGTGGTAGTTTGTCTAG
ATGAAGAAGAGGAAGAGGAGGAGGAAGAACTGCCAGAAGATGATGAGGAAGAGGAGGAGGAGGAGGAGGA
AGATGATGATGATGATGATGATGATGTGATCATACAAGACTGA

Translation (550 aa):
MVRGWEPPPGLDCAISEGHKSEGTMPPNKEASGLSSSPAGLICLPPISEELQLVWTQAAQTSELDSNEHL
LKTFSYFPYPSLADIALLCLRYGLQMEKVKTWFMAQRLRCGISWSSEEIEETRARVVYRRDQLHFKSLLS
FTHHAGRPPEEVPPPPVPAPEQVGIGIGPPTLSKPTQTKGLKVEPEEPSQMPPLPQSHQKLKESLMTPGS
GAFPYQSDFWQHLQSSGLSKEQAGRGPNQSHGIGTASWNHSTTVPQPQARDKPPPIALIASSCKEESASS
VTPSSSSTSSSFQVLANGATAASKPLQPLGCVPQSVSPSEQALPPHLEPAWPQGLRHNSVPGRVGPTEYL
SPDMQRQRKTKRKTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRYALKHGQLKWFR
DNAVPGAPSFQDPAIPTPPPSTRSLNERAETPPLPIPPPPPDIQPLERYWAAHQQLRETDIPQLSQASRL
STQQVLDWFDSRLPQPAEVVVCLDEEEEEEEEELPEDDEEEEEEEEEDDDDDDDDVIIQD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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