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Report for CCDS2300.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2300.1 Public Homo sapiens 2 ASNSD1 24 110 108 CCDS HistoryNCBI Gene:54529Re-query CCDS DB by CCDS ID:2300.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2300.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000260952.9 ENSP00000260952.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000260952.9Link to Ensembl Protein Viewer:ENSP00000260952.4Re-query CCDS DB by Nucleotide ID:ENST00000260952Re-query CCDS DB by Protein ID:ENSP00000260952
Original member Current member NCBI NM_001353497.2 NP_001340426.1 Accepted alive Link to Nucleotide Sequence:NM_001353497.2Link to Protein Sequence:NP_001340426.1Re-query CCDS DB by Nucleotide ID:NM_001353497Re-query CCDS DB by Protein ID:NP_001340426Link to BLAST:NP_001340426.1
Original member Current member NCBI NM_019048.4 NP_061921.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019048.4Link to Protein Sequence:NP_061921.2Re-query CCDS DB by Nucleotide ID:NM_019048Re-query CCDS DB by Protein ID:NP_061921Link to BLAST:NP_061921.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001340426.1 643 Q9NWL6-1 643 100% 0 0
NP_061921.2 643 Q9NWL6-1 643 100% 0 0

Chromosomal Locations for CCDS 2300.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 189666133 189667596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189667764 189667945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189670441 189670726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1932 nt):
ATGTGTGGCATTTGTTGTTCTGTAAACTTTTCTGCTGAGCATTTCAGTCAAGATTTAAAAGAGGACTTAC
TA
TATAATCTTAAACAGCGGGGACCCAATAGTAGTAAACAATTGTTAAAGTCTGATGTTAACTACCAGTG
T
TTATTTTCTGCTCACGTCCTACACTTGAGGGGTGTTTTGACTACCCAGCCTGTGGAAGATGAAAGAGGC
AAT
GTGTTTCTATGGAATGGAGAAATTTTTAGTGGAATAAAGGTTGAAGCTGAAGAGAATGACACTCAAA
TT
TTGTTTAATTATCTTTCCTCCTGTAAGAATGAATCTGAGATTTTGTCACTCTTCTCAGAAGTACAAGG
T
CCCTGGTCATTTATATATTATCAAGCATCTAGTCATTATTTATGGTTTGGTAGGGATTTTTTTGGTCGC
CGT
AGCTTGCTTTGGCATTTTAGTAATTTGGGCAAGAGTTTCTGCCTCTCTTCAGTTGGCACCCAAACAT
CT
GGATTGGCAAATCAGTGGCAAGAAGTTCCAGCATCTGGACTTTTCAGAATTGATCTTAAGTCTACTGT
C
ATTTCCGGATGCATTATTTTACAACTGTATCCTTGGAAATATATTTCTAGGGAGAATATTATTGAAGAA
AAT
GTTAATAGCCTGAGTCAAATTTCAGCAGACTTACCAGCATTTGTATCAGTGGTAGCAAATGAAGCCA
AA
CTGTATCTTGAAAAACCTGTTGTTCCTTTAAATATGATGTTGCCACAAGCTGCATTGGAGACTCATTG
C
AGTAATATTTCCAATGTGCCACCTACAAGAGAGATACTTCAAGTCTTTCTTACTGATGTACACATGAAG
GAA
GTAATTCAGCAGTTCATTGATGTCCTGAGTGTAGCAGTCAAGAAACGTGTCTTGTGTTTACCTAGGG
AT
GAAAACCTGACAGCAAATGAAGTTTTGAAAACGTGTGATAGGAAAGCAAATGTTGCAATCCTGTTTTC
T
GGGGGCATTGATTCCATGGTTATTGCAACCCTTGCTGACCGTCATATTCCTTTAGATGAACCAATTGAT
CTT
CTTAATGTAGCTTTCATAGCTGAAGAAAAGACCATGCCAACTACCTTTAACAGAGAAGGGAATAAAC
AG
AAAAATAAATGTGAAATACCTTCAGAAGAATTCTCTAAAGATGTTGCTGCTGCTGCTGCTGACAGTCC
T
AATAAACATGTCAGTGTACCAGATCGAATCACAGGAAGGGCGGGACTAAAGGAACTACAAGCTGTTAGC
CCT
TCCCGAATTTGGAATTTTGTTGAAATTAATGTTTCTATGGAAGAACTGCAGAAATTAAGAAGAACTC
GA
ATATGTCACTTAATTCGGCCATTGGATACAGTTTTGGATGATAGCATTGGCTGTGCAGTCTGGTTTGC
T
TCTAGAGGAATTGGTTGGTTAGTGGCCCAGGAAGGAGTGAAATCCTATCAGAGCAATGCAAAGGTAGTT
CTC
ACTGGAATTGGTGCAGATGAGCAACTTGCAGGTTATTCTCGTCATCGTGTCCGCTTTCAGTCGCATG
GG
CTGGAAGGATTGAATAAGGAAATAATGATGGAACTGGGTCGAATTTCTTCTAGAAATCTTGGTCGTGA
T
GACAGAGTTATTGGTGATCATGGAAAAGAAGCAAGATTTCCTTTCCTGGATGAAAATGTTGTCTCCTTT
CTA
AATTCTCTGCCGATTTGGGAAAAAGCAAACTTGACTTTACCCCGAGGAATTGGTGAAAAATTACTTT
TA
CGCCTTGCAGCTGTGGAACTTGGTCTTACAGCCTCTGCTCTTCTGCCCAAACGGGCCATGCAGTTTGG
A
TCAAGAATTGCAAAAATGGAAAAAATTAATGAAAAGGCATCTGATAAATGTGGACGGCTCCAAATCATG
TCC
TTAGAAAATCTTTCTATTGAAAAGGAGACTAAATTGTAA


Translation (643 aa):
MCGICCSVNFSAEHFSQDLKEDLLYNLKQRGPNSSKQLLKSDVNYQCLFSAHVLHLRGVLTTQPVEDERG
N
VFLWNGEIFSGIKVEAEENDTQILFNYLSSCKNESEILSLFSEVQGPWSFIYYQASSHYLWFGRDFFGR
R
SLLWHFSNLGKSFCLSSVGTQTSGLANQWQEVPASGLFRIDLKSTVISGCIILQLYPWKYISRENIIEE
N
VNSLSQISADLPAFVSVVANEAKLYLEKPVVPLNMMLPQAALETHCSNISNVPPTREILQVFLTDVHMK
E
VIQQFIDVLSVAVKKRVLCLPRDENLTANEVLKTCDRKANVAILFSGGIDSMVIATLADRHIPLDEPID
L
LNVAFIAEEKTMPTTFNREGNKQKNKCEIPSEEFSKDVAAAAADSPNKHVSVPDRITGRAGLKELQAVS
P
SRIWNFVEINVSMEELQKLRRTRICHLIRPLDTVLDDSIGCAVWFASRGIGWLVAQEGVKSYQSNAK
VV
L
TGIGADEQLAGYSRHRVRFQSHGLEGLNKEIMMELGRISSRNLGRDDRVIGDHGKEA
RFPFLDENVVSF
L
NSLPIWEKANLTLPRGIGEKLLLRLAAVELGLTASALLPKRAMQFGSRIAKMEKINEKASDKCGRLQIM
S
LENLSIEKETKL




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser