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Report for CCDS11598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11598.1 Public Homo sapiens 17 MRPS23 24 110 108 CCDS HistoryNCBI Gene:51649Re-query CCDS DB by CCDS ID:11598.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11598.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313608.13 ENSP00000320184.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313608.13Link to Ensembl Protein Viewer:ENSP00000320184.8Re-query CCDS DB by Nucleotide ID:ENST00000313608Re-query CCDS DB by Protein ID:ENSP00000320184
Original member Current member NCBI NM_016070.4 NP_057154.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016070.4Link to Protein Sequence:NP_057154.2Re-query CCDS DB by Nucleotide ID:NM_016070Re-query CCDS DB by Protein ID:NP_057154Link to BLAST:NP_057154.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057154.2 190 Q9Y3D9 190 100% 0 0

Chromosomal Locations for CCDS 11598.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 57839783 57839935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57840926 57841052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57841183 57841260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57849240 57849410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 57849967 57850010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGGCAGGCAGCCGGCTGGAAACCGTAGGGAGCATCTTCTCTCGGACTCGGGACCTGGTTCGGGCCGGGG
TGCTGAAGGAGAAGCCCCTGTGGTTTGACGTATATGACGCCTTTCCCCCGCTGAGGGAGCCCGTCTTCCA
AAGGCCTCGAGTGCGATATGGCAAAGCCAAAGCTCCCATCCAAGACATCTGGTACCACGAGGATCGGATT
AGAGCGAAGTTTTATTCAGTGTATGGGTCTGGTCAAAGAGCTTTTGATCTATTCAATCCAAACTTCAAGT
CTACCTGTCAACGGTTTGTGGAGAAGTACACTGAGCTACAGAAACTTGGAGAAACAGATGAAGAGAAGTT
ATTTGTGGAAACAGGGAAGGCTTTATTGGCAGAAGGTGTCATTTTAAGACGAGTAGGCGAAGCAAGGACT
CAACACGGAGGTAGTCACGTTTCCCGGAAATCCGAACACTTGAGTGTCAGACCACAGACTGCGTTGGAAG
AAAACGAGACTCAGAAAGAAGTTCCACAGGACCAGCATTTGGAGGCACCTGCAGACCAGTCGAAAGGTCT
CTTGCCTCCCTGA

Translation (190 aa):
MAGSRLETVGSIFSRTRDLVRAGVLKEKPLWFDVYDAFPPLREPVFQRPRVRYGKAKAPIQDIWYHEDRI
RAKFYSVYGSGQRAFDLFNPNFKSTCQRFVEKYTELQKLGETDEEKLFVETGKALLAEGVILRRVGEART
QHGGSHVSRKSEHLSVRPQTALEENETQKEVPQDQHLEAPADQSKGLLPP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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