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Report for CCDS41325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41325.1 Public Homo sapiens 1 TMEM69 24 110 108 CCDS HistoryNCBI Gene:51249Re-query CCDS DB by CCDS ID:41325.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41325.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372025.5 ENSP00000361095.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372025.5Link to Ensembl Protein Viewer:ENSP00000361095.4Re-query CCDS DB by Nucleotide ID:ENST00000372025Re-query CCDS DB by Protein ID:ENSP00000361095
Original member Current member NCBI NM_016486.4 NP_057570.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016486.4Link to Protein Sequence:NP_057570.2Re-query CCDS DB by Nucleotide ID:NM_016486Re-query CCDS DB by Protein ID:NP_057570Link to BLAST:NP_057570.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057570.2 247 Q5SWH9 247 100% 0 0

Chromosomal Locations for CCDS 41325.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 45691069 45691110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45693204 45693905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGCTTCGCTTCATCCAGAAGTTTTCTCAAGCATCTTCAAAGATACTGAAGTACTCTTTCCCAGTGGGAC
TAAGAACCAGCAGAACAGATATACTTTCTCTCAAGATGTCTCTCCAGCAAAACTTTTCCCCATGTCCAAG
GCCTTGGCTTTCCTCATCATTTCCAGCGTATATGAGCAAGACACAGTGCTATCATACATCCCCCTGCAGC
TTTAAAAAGCAGCAGAAGCAAGCACTTCTAGCCAGACCCTCAAGCACCATCACTTACCTAACTGACAGCC
CAAAGCCAGCATTATGTGTAACTCTGGCAGGACTAATCCCCTTCGTTGCTCCACCACTGGTCATGCTGAT
GACAAAAACTTATATTCCCATATTAGCTTTTACTCAGATGGCTTATGGAGCCAGTTTCCTATCTTTCTTG
GGTGGGATCAGATGGGGTTTTGCTCTACCAGAAGGTAGTCCAGCCAAACCAGACTACCTTAATTTAGCTA
GCAGTGCAGCTCCTCTTTTCTTTTCATGGTTTGCCTTCCTTATTTCTGAAAGACTTAGTGAAGCCATAGT
CACAGTAATAATGGGTATGGGAGTAGCATTCCACCTTGAACTTTTTCTCTTACCACATTATCCCAACTGG
TTTAAAGCCCTGAGGATAGTAGTCACTTTATTGGCCACTTTTTCATTTATAATCACTTTAGTAGTTAAAA
GTAGTTTTCCAGAAAAAGGACATAAGAGACCTGGTCAAGTATAA

Translation (247 aa):
MLRFIQKFSQASSKILKYSFPVGLRTSRTDILSLKMSLQQNFSPCPRPWLSSSFPAYMSKTQCYHTSPCS
FKKQQKQALLARPSSTITYLTDSPKPALCVTLAGLIPFVAPPLVMLMTKTYIPILAFTQMAYGASFLSFL
GGIRWGFALPEGSPAKPDYLNLASSAAPLFFSWFAFLISERLSEAIVTVIMGMGVAFHLELFLLPHYPNW
FKALRIVVTLLATFSFIITLVVKSSFPEKGHKRPGQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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