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Report for CCDS7247.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7247.1 Public Homo sapiens 10 MBL2 24 110 108 CCDS HistoryNCBI Gene:4153Re-query CCDS DB by CCDS ID:7247.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7247.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373968.3 ENSP00000363079.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373968.3Link to Ensembl Protein Viewer:ENSP00000363079.3Re-query CCDS DB by Nucleotide ID:ENST00000373968Re-query CCDS DB by Protein ID:ENSP00000363079
Original member Current member EBI ENST00000675947.1 ENSP00000502615.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675947.1Link to Ensembl Protein Viewer:ENSP00000502615.1Re-query CCDS DB by Nucleotide ID:ENST00000675947Re-query CCDS DB by Protein ID:ENSP00000502615
Original member Current member EBI ENST00000674931.1 ENSP00000502789.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000674931.1Link to Ensembl Protein Viewer:ENSP00000502789.1Re-query CCDS DB by Nucleotide ID:ENST00000674931Re-query CCDS DB by Protein ID:ENSP00000502789
Original member Current member NCBI NM_000242.3 NP_000233.1 Accepted alive Link to Nucleotide Sequence:NM_000242.3Link to Protein Sequence:NP_000233.1Re-query CCDS DB by Nucleotide ID:NM_000242Re-query CCDS DB by Protein ID:NP_000233Link to BLAST:NP_000233.1
Original member Current member NCBI NM_001378373.1 NP_001365302.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001378373.1Link to Protein Sequence:NP_001365302.1Re-query CCDS DB by Nucleotide ID:NM_001378373Re-query CCDS DB by Protein ID:NP_001365302Link to BLAST:NP_001365302.1
Original member Current member NCBI NM_001378374.1 NP_001365303.1 Accepted alive Link to Nucleotide Sequence:NM_001378374.1Link to Protein Sequence:NP_001365303.1Re-query CCDS DB by Nucleotide ID:NM_001378374Re-query CCDS DB by Protein ID:NP_001365303Link to BLAST:NP_001365303.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000233.1 248 P11226 248 100% 0 0
NP_001365302.1 248 P11226 248 100% 0 0
NP_001365303.1 248 P11226 248 100% 0 0

Chromosomal Locations for CCDS 7247.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 52768137 52768510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52769247 52769315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52770670 52770786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 52771449 52771635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (747 nt):
ATGTCCCTGTTTCCATCACTCCCTCTCCTTCTCCTGAGTATGGTGGCAGCGTCTTACTCAGAAACTGTGA
CCTGTGAGGATGCCCAAAAGACCTGCCCTGCAGTGATTGCCTGTAGCTCTCCAGGCATCAACGGCTTCCC
AGGCAAAGATGGGCGTGATGGCACCAAGGGAGAAAAGGGGGAACCAGGCCAAGGGCTCAGAGGCTTACAG
GGCCCCCCTGGAAAGTTGGGGCCTCCAGGAAATCCAGGGCCTTCTGGGTCACCAGGACCAAAGGGCCAAA
AAGGAGACCCTGGAAAAAGTCCGGATGGTGATAGTAGCCTGGCTGCCTCAGAAAGAAAAGCTCTGCAAAC
AGAAATGGCACGTATCAAAAAGTGGCTCACCTTCTCTCTGGGCAAACAAGTTGGGAACAAGTTCTTCCTG
ACCAATGGTGAAATAATGACCTTTGAAAAAGTGAAGGCCTTGTGTGTCAAGTTCCAGGCCTCTGTGGCCA
CCCCCAGGAATGCTGCAGAGAATGGAGCCATTCAGAATCTCATCAAGGAGGAAGCCTTCCTGGGCATCAC
TGATGAGAAGACAGAAGGGCAGTTTGTGGATCTGACAGGAAATAGACTGACCTACACAAACTGGAACGAG
GGTGAACCCAACAATGCTGGTTCTGATGAAGATTGTGTATTGCTACTGAAAAATGGCCAGTGGAATGACG
TCCCCTGCTCCACCTCCCATCTGGCCGTCTGTGAGTTCCCTATCTGA

Translation (248 aa):
MSLFPSLPLLLLSMVAASYSETVTCEDAQKTCPAVIACSSPGINGFPGKDGRDGTKGEKGEPGQGLRGLQ
GPPGKLGPPGNPGPSGSPGPKGQKGDPGKSPDGDSSLAASERKALQTEMARIKKWLTFSLGKQVGNKFFL
TNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQNLIKEEAFLGITDEKTEGQFVDLTGNRLTYTNWNE
GEPNNAGSDEDCVLLLKNGQWNDVPCSTSHLAVCEFPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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