CCDS Report for Consensus CDS

PubMed

Entrez

Gene

BLAST

OMIM

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Genome Displays

	Ensembl
	NCBI
	UCSC
	VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS67439.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
67439.1	Public	Homo sapiens	18	ANKRD62	24	110	108

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Attributes
Inferred exon combination

Sequence IDs included in CCDS 67439.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000587848.3	ENSP00000467740.2	MANE Select	Accepted	alive
		NCBI	NM_001277333.2	NP_001264262.1	MANE Select	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001264262.1	917	A6NC57-1	917	100%	0	0

Chromosomal Locations for CCDS 67439.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)

Genome Browser links:

Chromosome	Start	Stop
18	12094018	12094235
18	12095171	12095285
18	12095437	12095610
18	12096196	12096302
18	12097640	12097777
18	12099615	12099682
18	12103158	12103228
18	12107295	12107467
18	12115088	12115121
18	12115393	12115534
18	12122303	12122516
18	12124137	12124320
18	12125460	12126383
18	12127748	12127939

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2754 nt):
ATGGAGGTCAGGGGGTCGTTCCTGGCGGCCTGCAGGAGACGCATGGCTACCTGGAGGAAGAATCGTGACA AGGATGGCTTCTCAAATCCCGGGTACCGAGTCCGGCAGAAGGATCTGGGCATGATCCACAAAGCTGCCAT CGCAGGTGATGTGAACAAGGTGATGGAGAGCATCTTGCTCAGGCTGAATGACTTGAACGACAGGGACAAG AAGAACAGGACTGCTCTACTTTTGGCGTGTGCCCATGGCCGTCCAGGAGTGGTAGCTGACCTGGTGGCCA GAAAATGCCAGCTTAACCTCACTGACAGTGAAAACAGGACAGCTCTGATCAAGGCTGTACAATGTCAAGA AGAAGTTTGTGCATCCATCCTGCTGGAACATGGCGCCAACCCAAATGTTAGAGATATGTATGGCAACACT GCTCTGCACTATGCCATTGATAATGAGAATATATCAATGGCAAGAAAACTGCTTGCATATGGTGCAGATA TTGAAGCAAGAAGCCAGGATGGACATACATCACTTTTACTCGCTGTAAATAGGAAAAAAGAGCAAATGGT GGCATTTTTGTTGAAGAAAAAACCAGATTTAACTGCAATAGATAATTTTGGAAGAACAGCCCTGATACTT GCTGCTCGTAATGGATCAACAAGTGTAGTCTACCAGCTTCTTCAGCACAATATTGATGTCTTTTGCCAAG ATATATCTGGATGGACTGCAGAAGACTACGCTGTTGCTTCTAAGTTTCAAGCCATTCGTGGAATGATTTC TGAATATAAAGCAAACAAGAGATGTAAAAGTCTTCAAAATAGCAATTCAGAACAAGACTTAGAAATGACA TCAGAGGGAGAGCAAGAAAGGCTTGAAGGATGTGAAAGTAGCCAGCCACAGGTTGAAGAAAAAATGAAGA AATGCAGAAATAAGAAAATGGAAGTGTCAAGAAACGTACATGCTGATGACAGTGACAATTATAATGATGA TGTTGATGAATTAATTCACAAAATAAAGAACAGAAAACCTGATAATCATCAATCTCCTGGGAAGGAGAAT GGCGAGTTTGATAGGCTTGCAAGGAAAACCTCTAATGAAAAGAGCAAGGTTAAAAGCCAAATATATTTCA CGGATGACCTTAATGACATAAGTGGGTCATCTGAAAAAACCTCAGAGGATGATGAGTTGCCTTACTCTGA TGATGAGAATTTTATGTTACTCATTGAACAAAGTGGAATGGAGTGTAAAGATTTTGTTAGCCTATCGAAA AGCAAGAATGCAACAGCTGCATGTGGAAGATCAATAGAGGATCAAAAATGTTACTGTGAACGACTTAAAG TAAAATTTCAAAAAATGAAAAATAATATTAGCGTACTACAAAAGGTACTATCTGAAACAGACAAAACCAA ATCACAGTCAGAGCATCAGAATCTTCAAGGGAAAAAAAAGCTCTGTAATTTGAGATTTATCTTACAACAA CAAGAAGAAGAAAGAATAAAGGCTGAAGAGTTGTATGAAAAAGATATAGAAGAGTTAAAAATAATGGAAG AGCAATATAGGACACAAACTGAAGTGAAAAAACAATCTAAACTGACTCTCAAATCATTGGAAGTGGAATT GAAGACTGTAAGAAGTAACTCAAATCAGAATTTTCATACTCATGAAAGAGAAAGAGACCTGTGGCAGGAA AATCACTTGATGCGGGATGAAATTGCCAGACTCAGGCTGGAAATAGACACAATAAAACATCAGAACCAGG AAACTGAAAATAAATATTTCAAAGATATTGAAATTATAAAGGAAAACAATGAAGACCTTGAAAAGACTCT CAAGCGGAATGAGGAAGCATTAACAAAAACAATAACCCGGTATAGTAAAGAGCTTAATGTTCTGATGGAT GAGAATACAATGCTCAATTCTGAGCTACAGAAGGAAAAACAAAGCATGTCAAGACTGGAAACAGAAATGG AATCATACCGTTGTAGACTGGCTGCTGCCCTATGTGATCATGATCAACGTCAGTCATCAAAAAGAGACCT ACAGCTTGCTTTCCAGAGCACAGTGAATGAATGGTGTCATTTACAAGAAGACACTAATTCTCACATTCAG ATTCTTTCTCAGCAACTTTCTAAAGCTGAGAGTACATCCAGTGGCCTGGAAACTGAGCTCCATTATGAAA GAGAGGCTCTCAAAGAAAAGACGTTGCATATAGAACACATGCAAGGAGTCCTAAGCCGAACACAGCGTCG ATTGGAGGACATTGAACACATGTACCAAAATGACCAACCTATTTTGGAAAAATACGTGAGAAAGCAGCAA TCTGTAGAGGATGGACTATTTCAACTACAAAGCCAAAATCTGTTGTATCAACAGCAGTGTAATGATGCTC GCAAGAAAGCTGACAATCAGGAGAAAACAATAATTAATATCCAAGTCAAATGTGAAGATACTGTAGAAAA ACTTCAAGCTGAGTGTAGAAAGCTAGAAGAGAACAATAAGGGGTTGATGAAGGAATGCACTCTTTTAAAA GAAAGACAATGCCAATATGAAAAAGAGAAAGAAGAAAGAGAAGTAGTCAGGAGACAGCTTCAACGAGAAG TGGATGATGCCCTGAACAAACAATTGCTGTTAGAAGCTATGCTAGAGATTTCATCAGAACGTCGTATTAA TTTAGAAGATGAGGCACAAAGTTTAAAAAAGAAATTAGGCCAGATGAGAAGTCAAGTATGTATGAAACTT AGCATGTCAACAGTTACTCTGTAG
Translation (917 aa):
MEVRGSFLAACRRRMATWRKNRDKDGFSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDK KNRTALLLACAHGRPGVVADLVARKCQLNLTDSENRTALIKAVQCQEEVCASILLEHGANPNVRDMYGNT ALHYAIDNENISMARKLLAYGADIEARSQDGHTSLLLAVNRKKEQMVAFLLKKKPDLTAIDNFGRTALIL AARNGSTSVVYQLLQHNIDVFCQDISGWTAEDYAVASKFQAIRGMISEYKANKRCKSLQNSNSEQDLEMT SEGEQERLEGCESSQPQVEEKMKKCRNKKMEVSRNVHADDSDNYNDDVDELIHKIKNRKPDNHQSPGKEN GEFDRLARKTSNEKSKVKSQIYFTDDLNDISGSSEKTSEDDELPYSDDENFMLLIEQSGMECKDFVSLSK SKNATAACGRSIEDQKCYCERLKVKFQKMKNNISVLQKVLSETDKTKSQSEHQNLQGKKKLCNLRFILQQ QEEERIKAEELYEKDIEELKIMEEQYRTQTEVKKQSKLTLKSLEVELKTVRSNSNQNFHTHERERDLWQE NHLMRDEIARLRLEIDTIKHQNQETENKYFKDIEIIKENNEDLEKTLKRNEEALTKTITRYSKELNVLMD ENTMLNSELQKEKQSMSRLETEMESYRCRLAAALCDHDQRQSSKRDLQLAFQSTVNEWCHLQEDTNSHIQ ILSQQLSKAESTSSGLETELHYEREALKEKTLHIEHMQGVLSRTQRRLEDIEHMYQNDQPILEKYVRKQQ SVEDGLFQLQSQNLLYQQQCNDARKKADNQEKTIINIQVKCEDTVEKLQAECRKLEENNKGLMKECTLLK ERQCQYEKEKEEREVVRRQLQREVDDALNKQLLLEAMLEISSERRINLEDEAQSLKKKLGQMRSQVCMKL SMSTVTL

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH