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Report for CCDS53826.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53826.2 Public Homo sapiens 12 MYO1H 24 110 108 CCDS HistoryNCBI Gene:283446Re-query CCDS DB by CCDS ID:53826.2See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 53826.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310903.10 ENSP00000439182.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310903.10Link to Ensembl Protein Viewer:ENSP00000439182.2Re-query CCDS DB by Nucleotide ID:ENST00000310903Re-query CCDS DB by Protein ID:ENSP00000439182
Original member Current member NCBI NM_001101421.4 NP_001094891.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001101421.4Link to Protein Sequence:NP_001094891.4Re-query CCDS DB by Nucleotide ID:NM_001101421Re-query CCDS DB by Protein ID:NP_001094891Link to BLAST:NP_001094891.4

Chromosomal Locations for CCDS 53826.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 109347961 109347972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109388683 109388844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109393331 109393446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109396384 109396582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109397732 109397812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109401093 109401272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109403982 109404080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109405922 109406035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109406789 109406860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109407794 109407913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109409557 109409624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109409963 109410068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109410688 109410768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109411894 109411985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109415526 109415620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109420981 109421027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109424748 109424828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109425946 109426051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109427469 109427586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109432897 109433010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109435037 109435113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109436488 109436556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109438536 109438620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109439631 109439790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109440744 109440827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109441615 109441708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109442217 109442272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109443514 109443649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109444213 109444283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109444432 109444529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109445513 109445612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 109447159 109447182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3117 nt):
ATGGAATCCAAGAAAGAAGACGTGAGGAGGAAACACATCCGTCTGCACATGGAAGGGGCGCTGACTGCCC
GGGACAAGGTCGGGGTTCAGGATTTTGTGCTATTGGACGCGTACACCAGCGAATCTGCCTTTGTCGACAA
CCTCCGCAAGCGTTTCAGCGAGAACCTCATATACACATATATTGGCACCCTCCTTGTGTCTGTGAATCCA
TACCAGGAGCTCGGAATCTACACTGTGAGCCAGATGGAACTTTATCAAGGGGTCAATTTCTTTGAACTGC
CACCACATGTCTACGCTATAGCCGACAACGCTTACCGAATGATGTGTGCTGAACTAAATAACCATTTCAT
CCTCATTTCTGGAGAGAGTGGGGCAGGGAAAACAGAGGCCTCCAAGAAAATTCTCGAGTATTTTGCAGTG
ACCTGCCCAATGACCCAGTCACTACAAATAGCCCGTGACAGACTGCTGTTCTCCAACCCAGTGCTGGAGG
CTTTTGGAAATGCCAGAACGCTCCGGAATGACAACTCCAGCAGATTTGGGAAATACATGGATATACAATT
TGATTTTCAGGGCATTCCCGTAGGTGGGCATATCATCAGTTACTTGATAGAGAAGTCCCGAGTTGTCTAC
CAAAACGAAGGCGAGCGGAATTTCCACATCTTCTACCAGCTGCTGGCAGGTGGCGAAGAGGAGCGCCTGT
CTTACCTGGGACTCGAGCGAGACCCCCAGCTGTATAAATACCTCTCACAGGGTCATTGTGCCAAAGAGTC
ATCCATTAGTGACAAGAATGACTGGAAAACTGTTTCCAACGCCTTTTCTGTCATTGATTTTACTGAAGCT
GACCTCGAGAATCTCTTTGGAATTATTGCCAGTGTCTTACACCTGGGGAACATTGGTTTTGAAGAAGACG
ACCAAGGCTGTGCCACTATCCCAGACACCCATGAGATCAAGTGGATAGCCAAGCTCCTGGGGGTCCACCC
ATCAGTCCTTCTGGAAGCTCTCACCCACAGAAAAATTGAAGCCAAAACTGAGGAGGTGATCTGCCCGTTG
ACACTAGAACTCTCTGTCTACGCTAGAGATGCAATGGCAAAGGCTGTTTATGGACGAACGTTTACTTGGC
TGGTCAACAAAATCAATTCCTCCTTAGTTAACAAGGATTTCACCAGGAAAACTGTAATTGGATTACTGGA
CATCTATGGGTTTGAAGTCTTTGACAAGAATGGTTTTGAACAGTTCTGTATAAATTACTGCAATGAGAAA
CTCCAGCAACTGTTAATTGAGAGGACTCTAAAAGCAGAACAGGCAGAATATGAAATGGAAGGCATAGAGT
GGGAGCCAATTAAATATTTCAACAACAAGATCATCTGTGATTTGGTAGAAGAGAGACATAAAGGAATCAT
ATCTATTCTGGATGAAGAATGCATTCGGCCTGGTCCTGCTACAGACTTGAGTTTCCTGGAGAAATTGGAA
GAGAAAGTGGGCAAACATGCACACTTCGAAACCCGTAAGCTGGCTGGTCCAAAGGGCCGAAAGAGGATTG
GCTGGATGGAGTTCCGACTCCTCCACTATGCAGGAGAGGTCACATACTGCACCAAGGGATTCTTGGAAAA
AAACAATGATCTTCTTTACAGACATCTGAAAGAAGTGCTGTGCAAGTCCAAGAACATTATCCTGAGGGAA
TGCTTCCTGCTGGCCGAGTTAGAAAACCGGAGGAGGCCCCCAACAGTGGGGACTCAGTTTAAAAACAGTC
TGAGCAGCCTTCTAGAAACCCTCATCTCTAAGGAGCCCTCCTACATCCGTTGCATCAAGCCCAACGACAG
GAAAGAACCCAGCAAATTTGATGACTTCCTCATAAGGCATCAGATCAAATACCTGGGGCTGATGGAGCAC
CTGCGGGTGAGACGGGCTGGTTTTGCATACCGAAGGAAATACGAGCATTTCTTGCAAAGGTACAAGTCCT
TATGCCCAGACACCTGGCCGCACTGGCACGGGCCTCCAGCAGAGGGCGTGGAACGGCTGATCAAGTACAT
CGGCTACAAACCCGAGGAATACAAGTTAGGCAAAACCAAAATATTCATTCGTTTCCCCAGAACTCTGTTT
GCTACCGAAGATGCCTTTGAATTTAGTAAACATCAACTAGTTGCAAGAATCCAAGCCACTTACAAACGCT
GCCTAGGAAGGAGAGAATACGTGAAAAAAAGACAAGCAGCCATCAAACTGGAAGCCCACTGGCGTGGGGC
CCTGGCTCGGAAGGCAATCCAAAGGAGAAAGTGGGCCGTGCGGATTATCAGAAAGTTCATTAAAGGATTC
ATCAGTCGCAACAAACCCCTCTGTCCTGACAACGAGGAATTTATCGTGTTTGTGCGGAAGAATTACATCT
TGAATCTCCGGTATCACCTTCCAAAGACTGTCCTGGACAAGAGCTGGCTGAGGCCTCCTGGCATCTTGGA
AAATGCATCAGATCTGCTCAGGAAAATGTGCGTGAGGAACCTGGTGCAGAAGTACTGCCGCGGGATCACA
GCTGAGCGGAAAGCAATGATGCAGCAAAAGGTAGTTACAAGTGAAATCTTCAGGGGAAGGAAAGACGGCT
ACACAGAAAGTTTAAATCAACCCTTTGTCAACAGTCGGATAGATGAAGGAGACATTAATCCGAAAGTGCT
TCAGCTAATTAGCCATGAGAAAATCCAGTATGGTGTCCCGGTCATTAAATATGACAGAAAAGGCTTCAAA
GCACGGCAGCGGCAACTCATTCTTACTCAGAAAGCAGCTTACGTGGTGGAACTTGCCAAAATCAAGCAGA
AAATAGAGTACTCAGCTCTCAAAGGTGTCTCCACTAGCAATCTGAGTGATGGAATCTTAGTCATTCATGT
TTCACCAGAGGACAGCAAGCAAAAGGGGGATGCCGTTTTGCAGTGTGGACACGTGTTTGAAGCAGTTACT
AAACTCGTCATGCTGGTTAAGAAGGAGAACATTGTCAATGTTGTTCAAGGAAGTTTACAGTTTTTTATTA
GTCCGGGAAAAGAAGGCACAATAGTTTTCGACACTGGACTGGAAGAACAAGTCTATAAAAATAAAAATGG
ACAATTAACAGTGGTGTCAGTCCGGAGGAAGTCCTGA

Translation (1038 aa):
MESKKEDVRRKHIRLHMEGALTARDKVGVQDFVLLDAYTSESAFVDNLRKRFSENLIYTYIGTLLVSVNP
YQELGIYTVSQMELYQGVNFFELPPHVYAIADNAYRMMCAELNNHFILISGESGAGKTEASKKILEYFAV
TCPMTQSLQIARDRLLFSNPVLEAFGNARTLRNDNSSRFGKYMDIQFDFQGIPVGGHIISYLIEKSRVVY
QNEGERNFHIFYQLLAGGEEERLSYLGLERDPQLYKYLSQGHCAKESSISDKNDWKTVSNAFSVIDFTEA
DLENLFGIIASVLHLGNIGFEEDDQGCATIPDTHEIKWIAKLLGVHPSVLLEALTHRKIEAKTEEVICPL
TLELSVYARDAMAKAVYGRTFTWLVNKINSSLVNKDFTRKTVIGLLDIYGFEVFDKNGFEQFCINYCNEK
LQQLLIERTLKAEQAEYEMEGIEWEPIKYFNNKIICDLVEERHKGIISILDEECIRPGPATDLSFLEKLE
EKVGKHAHFETRKLAGPKGRKRIGWMEFRLLHYAGEVTYCTKGFLEKNNDLLYRHLKEVLCKSKNIILRE
CFLLAELENRRRPPTVGTQFKNSLSSLLETLISKEPSYIRCIKPNDRKEPSKFDDFLIRHQIKYLGLMEH
LRVRRAGFAYRRKYEHFLQRYKSLCPDTWPHWHGPPAEGVERLIKYIGYKPEEYKLGKTKIFIRFPRTLF
ATEDAFEFSKHQLVARIQATYKRCLGRREYVKKRQAAIKLEAHWRGALARKAIQRRKWAVRIIRKFIKGF
ISRNKPLCPDNEEFIVFVRKNYILNLRYHLPKTVLDKSWLRPPGILENASDLLRKMCVRNLVQKYCRGIT
AERKAMMQQKVVTSEIFRGRKDGYTESLNQPFVNSRIDEGDINPKVLQLISHEKIQYGVPVIKYDRKGFK
ARQRQLILTQKAAYVVELAKIKQKIEYSALKGVSTSNLSDGILVIHVSPEDSKQKGDAVLQCGHVFEAVT
KLVMLVKKENIVNVVQGSLQFFISPGKEGTIVFDTGLEEQVYKNKNGQLTVVSVRRKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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