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Report for CCDS13969.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13969.2 Public Homo sapiens 22 TMEM184B 24 110 108 CCDS HistoryNCBI Gene:25829Re-query CCDS DB by CCDS ID:13969.2See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 13969.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361684.8 ENSP00000354441.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361684.8Link to Ensembl Protein Viewer:ENSP00000354441.4Re-query CCDS DB by Nucleotide ID:ENST00000361684Re-query CCDS DB by Protein ID:ENSP00000354441
Original member Current member EBI ENST00000361906.8 ENSP00000355210.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361906.8Link to Ensembl Protein Viewer:ENSP00000355210.3Re-query CCDS DB by Nucleotide ID:ENST00000361906Re-query CCDS DB by Protein ID:ENSP00000355210
Original member Current member NCBI NM_001195071.1 NP_001182000.1 Accepted alive Link to Nucleotide Sequence:NM_001195071.1Link to Protein Sequence:NP_001182000.1Re-query CCDS DB by Nucleotide ID:NM_001195071Re-query CCDS DB by Protein ID:NP_001182000Link to BLAST:NP_001182000.1
Original member Current member NCBI NM_012264.5 NP_036396.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012264.5Link to Protein Sequence:NP_036396.2Re-query CCDS DB by Nucleotide ID:NM_012264Re-query CCDS DB by Protein ID:NP_036396Link to BLAST:NP_036396.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182000.1 407 Q9Y519 407 100% 0 0
NP_036396.2 407 Q9Y519 407 100% 0 0

Chromosomal Locations for CCDS 13969.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 38221469 38221710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38224785 38224979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38225424 38225593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38226779 38226870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38230669 38230744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38231244 38231334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38245935 38246100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38247770 38247961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGACAGTGAGGGGGGATGTGCTGGCCCCGGATCCAGCGTCGCCCACGACCGCAGCAGCCTCGCCCAGCG
TCTCCGTGATCCCCGAGGGCAGCCCCACTGCCATGGAGCAGCCTGTGTTCCTGATGACAACTGCCGCTCA
GGCCATCTCTGGCTTCTTCGTGTGGACGGCCCTGCTCATCACATGCCACCAGATCTACATGCACCTGCGC
TGCTACAGCTGCCCCAACGAGCAGCGCTACATCGTGCGCATCCTCTTCATCGTGCCCATCTACGCCTTTG
ACTCCTGGCTCAGCCTCCTCTTCTTCACCAACGACCAGTACTACGTGTACTTCGGCACCGTCCGCGACTG
CTATGAGGCCTTGGTCATCTATAATTTCCTGAGCCTGTGCTATGAGTACCTAGGAGGAGAAAGTTCCATC
ATGTCGGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATGTATGGCACCTGCTGCCTCTGGGGAAAGA
CTTATTCCATCGGATTTCTGAGGTTCTGCAAACAGGCCACCCTGCAGTTCTGTGTGGTGAAGCCACTCAT
GGCGGTCAGCACTGTGGTCCTCCAGGCCTTCGGCAAGTACCGGGATGGGGACTTTGACGTCACCAGTGGC
TACCTCTACGTGACCATCATCTACAACATCTCCGTCAGCCTGGCCCTCTACGCCCTCTTCCTCTTCTACT
TCGCCACCCGGGAGCTGCTCAGCCCCTACAGCCCCGTCCTCAAGTTCTTCATGGTCAAGTCCGTCATCTT
TCTTTCCTTCTGGCAAGGCATGCTCCTGGCCATCCTGGAGAAGTGTGGGGCCATCCCCAAAATCCACTCG
GCCCGCGTGTCGGTGGGCGAGGGCACCGTGGCTGCCGGCTACCAGGACTTCATCATCTGTGTGGAGATGT
TCTTTGCAGCCCTGGCCCTGCGGCACGCCTTCACCTACAAGGTCTATGCTGACAAGAGGCTGGACGCACA
AGGCCGCTGTGCCCCCATGAAGAGCATCTCCAGCAGCCTCAAGGAGACCATGAACCCGCACGACATCGTG
CAGGACGCCATCCACAACTTCTCACCTGCCTACCAGCAGTACACGCAGCAGTCCACCCTGGAGCCTGGGC
CCACCTGGCGTGGTGGCGCCCACGGCCTCTCCCGCTCCCACAGCCTCAGTGGCGCCCGCGACAACGAGAA
GACTCTCCTGCTCAGCTCTGATGATGAATTCTAG

Translation (407 aa):
MTVRGDVLAPDPASPTTAAASPSVSVIPEGSPTAMEQPVFLMTTAAQAISGFFVWTALLITCHQIYMHLR
CYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEALVIYNFLSLCYEYLGGESSI
MSEIRGKPIESSCMYGTCCLWGKTYSIGFLRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSG
YLYVTIIYNISVSLALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKIHS
ARVSVGEGTVAAGYQDFIICVEMFFAALALRHAFTYKVYADKRLDAQGRCAPMKSISSSLKETMNPHDIV
QDAIHNFSPAYQQYTQQSTLEPGPTWRGGAHGLSRSHSLSGARDNEKTLLLSSDDEF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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