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Report for CCDS777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
777.1 Public Homo sapiens 1 S1PR1 24 110 108 CCDS HistoryNCBI Gene:1901Re-query CCDS DB by CCDS ID:777.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 777.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305352.7 ENSP00000305416.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000305352.7Link to Ensembl Protein Viewer:ENSP00000305416.6Re-query CCDS DB by Nucleotide ID:ENST00000305352Re-query CCDS DB by Protein ID:ENSP00000305416
Original member Current member EBI ENST00000649383.1 ENSP00000497175.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649383.1Link to Ensembl Protein Viewer:ENSP00000497175.1Re-query CCDS DB by Nucleotide ID:ENST00000649383Re-query CCDS DB by Protein ID:ENSP00000497175
Original member Current member EBI ENST00000648480.1 ENSP00000497478.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648480.1Link to Ensembl Protein Viewer:ENSP00000497478.1Re-query CCDS DB by Nucleotide ID:ENST00000648480Re-query CCDS DB by Protein ID:ENSP00000497478
Original member Current member EBI ENST00000475289.2 ENSP00000498038.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000475289.2Link to Ensembl Protein Viewer:ENSP00000498038.1Re-query CCDS DB by Nucleotide ID:ENST00000475289Re-query CCDS DB by Protein ID:ENSP00000498038
Original member Current member NCBI NM_001320730.2 NP_001307659.1 Accepted alive Link to Nucleotide Sequence:NM_001320730.2Link to Protein Sequence:NP_001307659.1Re-query CCDS DB by Nucleotide ID:NM_001320730Re-query CCDS DB by Protein ID:NP_001307659Link to BLAST:NP_001307659.1
Original member Current member NCBI NM_001400.5 NP_001391.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001400.5Link to Protein Sequence:NP_001391.2Re-query CCDS DB by Nucleotide ID:NM_001400Re-query CCDS DB by Protein ID:NP_001391Link to BLAST:NP_001391.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307659.1 382 P21453 382 100% 0 0
NP_001391.2 382 P21453 382 100% 0 0

Chromosomal Locations for CCDS 777.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 101238985 101240133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGGGGCCCACCAGCGTCCCGCTGGTCAAGGCCCACCGCAGCTCGGTCTCTGACTACGTCAACTATGATA
TCATCGTCCGGCATTACAACTACACGGGAAAGCTGAATATCAGCGCGGACAAGGAGAACAGCATTAAACT
GACCTCGGTGGTGTTCATTCTCATCTGCTGCTTTATCATCCTGGAGAACATCTTTGTCTTGCTGACCATT
TGGAAAACCAAGAAATTCCACCGACCCATGTACTATTTTATTGGCAATCTGGCCCTCTCAGACCTGTTGG
CAGGAGTAGCCTACACAGCTAACCTGCTCTTGTCTGGGGCCACCACCTACAAGCTCACTCCCGCCCAGTG
GTTTCTGCGGGAAGGGAGTATGTTTGTGGCCCTGTCAGCCTCCGTGTTCAGTCTCCTCGCCATCGCCATT
GAGCGCTATATCACAATGCTGAAAATGAAACTCCACAACGGGAGCAATAACTTCCGCCTCTTCCTGCTAA
TCAGCGCCTGCTGGGTCATCTCCCTCATCCTGGGTGGCCTGCCTATCATGGGCTGGAACTGCATCAGTGC
GCTGTCCAGCTGCTCCACCGTGCTGCCGCTCTACCACAAGCACTATATCCTCTTCTGCACCACGGTCTTC
ACTCTGCTTCTGCTCTCCATCGTCATTCTGTACTGCAGAATCTACTCCTTGGTCAGGACTCGGAGCCGCC
GCCTGACGTTCCGCAAGAACATTTCCAAGGCCAGCCGCAGCTCTGAGAAGTCGCTGGCGCTGCTCAAGAC
CGTAATTATCGTCCTGAGCGTCTTCATCGCCTGCTGGGCACCGCTCTTCATCCTGCTCCTGCTGGATGTG
GGCTGCAAGGTGAAGACCTGTGACATCCTCTTCAGAGCGGAGTACTTCCTGGTGTTAGCTGTGCTCAACT
CCGGCACCAACCCCATCATTTACACTCTGACCAACAAGGAGATGCGTCGGGCCTTCATCCGGATCATGTC
CTGCTGCAAGTGCCCGAGCGGAGACTCTGCTGGCAAATTCAAGCGACCCATCATCGCCGGCATGGAATTC
AGCCGCAGCAAATCGGACAATTCCTCCCACCCCCAGAAAGACGAAGGGGACAACCCAGAGACCATTATGT
CTTCTGGAAACGTCAACTCTTCTTCCTAG

Translation (382 aa):
MGPTSVPLVKAHRSSVSDYVNYDIIVRHYNYTGKLNISADKENSIKLTSVVFILICCFIILENIFVLLTI
WKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAI
ERYITMLKMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYILFCTTVF
TLLLLSIVILYCRIYSLVRTRSRRLTFRKNISKASRSSEKSLALLKTVIIVLSVFIACWAPLFILLLLDV
GCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMSCCKCPSGDSAGKFKRPIIAGMEF
SRSKSDNSSHPQKDEGDNPETIMSSGNVNSSS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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