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Report for CCDS33848.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33848.2 Public Homo sapiens 3 KBTBD12 24 110 108 CCDS HistoryNCBI Gene:166348Re-query CCDS DB by CCDS ID:33848.2See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 33848.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000405256.5 ENSP00000385879.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405256.5Link to Ensembl Protein Viewer:ENSP00000385879.1Re-query CCDS DB by Nucleotide ID:ENST00000405256Re-query CCDS DB by Protein ID:ENSP00000385879
Original member Current member EBI ENST00000405109.5 ENSP00000385957.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000405109.5Link to Ensembl Protein Viewer:ENSP00000385957.1Re-query CCDS DB by Nucleotide ID:ENST00000405109Re-query CCDS DB by Protein ID:ENSP00000385957
Original member Current member NCBI NM_001370224.1 NP_001357153.1 Accepted alive Link to Nucleotide Sequence:NM_001370224.1Link to Protein Sequence:NP_001357153.1Re-query CCDS DB by Nucleotide ID:NM_001370224Re-query CCDS DB by Protein ID:NP_001357153Link to BLAST:NP_001357153.1
Original member Current member NCBI NM_207335.4 NP_997218.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207335.4Link to Protein Sequence:NP_997218.2Re-query CCDS DB by Nucleotide ID:NM_207335Re-query CCDS DB by Protein ID:NP_997218Link to BLAST:NP_997218.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357153.1 623 Q3ZCT8-1 623 100% 0 0
NP_997218.2 623 Q3ZCT8-1 623 100% 0 0

Chromosomal Locations for CCDS 33848.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 127923062 127924131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127927764 127928034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127930133 127930283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127963189 127963386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127984097 127984278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1872 nt):
ATGGAGTGCAAGATTGAGGGAAAAGAAAAATACCAACATAGCTTGAATTTACTGAATAAAATTCAGAACA
TGAAAGAATTAGCAGAAATGATTGATGTGGTACTCACAGCAGAAGGAGAGAAATTTCCTTGCCACAGACT
GGTCCTGGCTGCATTTAGCCCTTATTTCAAAGCTATGTTCACCTGTGGACTACTTGAATGTAATCAAAGG
GAAGTCATACTTTATGACATCACAGCAGAAAGTGTGTCGGTGTTATTAAATTACATGTACAATGCAGCTT
TGGAGATCAATAATGCCAATGTACAGACTGTAGCTATGGCTGCCTATTTTATGCAGATGGAAGAAGTCTT
CAGTGTGTGTCAAAAATATATGATGGACCACATGGATGCCTCCAACTGTTTAGGTATCTATTATTTTGCA
AAGCAGATTGGAGCTGAAGATTTATCTGATCGATCAAAGAAATATTTATATCAGCACTTTGCCGAGGTGA
GCTTACATGAAGAAATACTAGAAATCGAAGTGCACCAATTTTTGACACTTATTAAATCAGATGATCTTAA
CATATCCAGAGAAGAGAGCATTCTGGACTTAGTTCTGAGATGGGTAAATCATAACAAAGAATTGCGTACA
GTGCATCTTGTTGAGCTTTTGAAGCAAGTCAGATTGGAACTTGTAAATCCTTCTTTTTTAAGACAAGCCC
TAAGAAGGAACACAATGCTTCTGTGTGATGCAGATTGTGTTGACATAATTCAAAATGCATTCAAAGCCAT
CAAGACACCCCAACAGCACTCTCTAAATCTGCGCTATGGTATGGAGACTACCAGTCTTCTGCTTTGCATT
GGCAACAATTCTTCAGGAATCAGATCAAGACATAGGAGCTATGGGGATGCCAGTTTTTGTTATGATCCTG
TATCACGGAAAACCTATTTCATCTCATCTCCCAAGTACGGAGAGGGTTTAGGAACTGTGTGTACTGGTGT
TGTCATGGAAAATAATACTATAATTGTGGCTGGAGAAGCAAGTGCCTCTAAACTCTCTAGACAAAAGAAC
AAGAATGTTGAAATTTATAGGTATCATGATAGAGGAAACCAGTTTTGGGAAAAGTTATGCACAGCTGAAT
TTCGAGAACTCTATGCTCTGGGCAGTATTCATAATGACCTTTATGTTATAGGAGGACAGATGAAAATTAA
AAACCAGTATCTTATTACAAACTGTGTTGATAAGTACTCTGTAGAACGGGACAATTGGAAAAGGGTGTCT
CCCCTTCCACTGCAATTGGCATGTCATGCTGTAGTGACAGTGAATAATAAACTTTATGTAATTGGAGGCT
GGACCCCTCAGATGGATCTTCCTGATGAAGAACCTGATCGATTAAGCAACAAACTGTTGCAGTATGACCC
CAGCCAAGATCAATGGAGTGTGCGGGCACCCATGAAGTACTCTAAGTACCGATTCAGTACAGCTGTAGTC
AACAGTGAGATTTATGTTTTGGGTGGCATTGGCTGTGTAGGTCAAGACAAGGGCCAGGTTCGAAAATGCC
TTGACGTGGTGGAGATCTACAACCCAGATGGGGACTTTTGGCGAGAGGGCCCTCCCATGCCAAGTCCCCT
CCTCTCACTCCGCACCAATTCCACCAATGCAGGGGCAGTGGATGGGAAACTCTATGTCTGCGGGGGATTC
CATGGAGCAGATCGCCATGAGGTTATCTCCAAAGAAATATTGGAACTGGACCCATGGGAAAACCAGTGGA
ATGTTGTAGCCATCAACGTCCTCATGCATGACAGCTATGATGTCTGCCTAGTAGCCAGGATGAATCCCCG
AGACCTCATCCCCCCGCCTTCAGATTTGGTGGAAGAAGGCAATGAGCACTAA

Translation (623 aa):
MECKIEGKEKYQHSLNLLNKIQNMKELAEMIDVVLTAEGEKFPCHRLVLAAFSPYFKAMFTCGLLECNQR
EVILYDITAESVSVLLNYMYNAALEINNANVQTVAMAAYFMQMEEVFSVCQKYMMDHMDASNCLGIYYFA
KQIGAEDLSDRSKKYLYQHFAEVSLHEEILEIEVHQFLTLIKSDDLNISREESILDLVLRWVNHNKELRT
VHLVELLKQVRLELVNPSFLRQALRRNTMLLCDADCVDIIQNAFKAIKTPQQHSLNLRYGMETTSLLLCI
GNNSSGIRSRHRSYGDASFCYDPVSRKTYFISSPKYGEGLGTVCTGVVMENNTIIVAGEASASKLSRQKN
KNVEIYRYHDRGNQFWEKLCTAEFRELYALGSIHNDLYVIGGQMKIKNQYLITNCVDKYSVERDNWKRVS
PLPLQLACHAVVTVNNKLYVIGGWTPQMDLPDEEPDRLSNKLLQYDPSQDQWSVRAPMKYSKYRFSTAVV
NSEIYVLGGIGCVGQDKGQVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTNAGAVDGKLYVCGGF
HGADRHEVISKEILELDPWENQWNVVAINVLMHDSYDVCLVARMNPRDLIPPPSDLVEEGNEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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