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Report for CCDS34346.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34346.1 Public Homo sapiens 6 MBOAT1 24 110 108 CCDS HistoryNCBI Gene:154141Re-query CCDS DB by CCDS ID:34346.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34346.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324607.8 ENSP00000324944.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324607.8Link to Ensembl Protein Viewer:ENSP00000324944.7Re-query CCDS DB by Nucleotide ID:ENST00000324607Re-query CCDS DB by Protein ID:ENSP00000324944
Original member Current member NCBI NM_001080480.3 NP_001073949.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080480.3Link to Protein Sequence:NP_001073949.1Re-query CCDS DB by Nucleotide ID:NM_001080480Re-query CCDS DB by Protein ID:NP_001073949Link to BLAST:NP_001073949.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073949.1 495 Q6ZNC8-1 495 100% 0 0

Chromosomal Locations for CCDS 34346.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 20102286 20102412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20109598 20109749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20112876 20113008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20115288 20115352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20118437 20118540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20124408 20124600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20126517 20126700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20128699 20128753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20131144 20131199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20144220 20144315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20151185 20151262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20152624 20152769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 20212136 20212234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGGCAGCAGAGCCGCAGCCGTCCAGCCTTTCCTACCGCACCACGGGCTCCACCTACCTGCACCCGCTCA
GCGAGCTCCTGGGCATCCCGCTGGACCAGGTGAATTTTGTGGTATGCCAGCTTGTTGCTCTGTTTGCTGC
TTTCTGGTTTCGCATCTACTTACGTCCTGGTACAACCAGCTCTGATGTCCGGCATGCGGTTGCCACCATT
TTTGGCATCTATTTTGTCATCTTTTGTTTCGGCTGGTACTCTGTGCATCTTTTTGTGCTGGTGTTAATGT
GCTATGCAATCATGGTCACTGCTAGTGTATCCAATATTCACAGATATTCCTTTTTTGTAGCAATGGGATA
TCTTACAATATGCCACATCAGCCGAATATACATCTTCCACTATGGAATTCTCACTACGGATTTTTCTGGG
CCTCTGATGATTGTCACTCAGAAGATCACAACCTTGGCATTCCAGGTTCATGATGGATTAGGTCGAAGAG
CTGAAGACCTTTCTGCTGAACAACATCGACTTGCTATCAAAGTGAAACCCTCTTTTTTGGAATACTTAAG
TTACCTTCTCAATTTCATGAGTGTCATAGCTGGTCCTTGTAACAATTTCAAGGACTACATAGCCTTCATT
GAGGGGAAGCATATACACATGAAGTTGCTGGAGGTGAACTGGAAGCGAAAAGGTTTCCACAGCTTGCCAG
AACCTTCTCCCACAGGAGCTGTGATACACAAGTTGGGCATCACCTTGGTGTCTCTCCTTTTGTTTTTGAC
GCTAACGAAGACCTTTCCTGTCACCTGCCTTGTGGATGACTGGTTTGTCCATAAAGCAAGCTTTCCGGCT
CGACTCTGCTACTTATATGTTGTCATGCAAGCCTCAAAGCCCAAGTATTACTTTGCATGGACATTAGCTG
ATGCAGTGAATAACGCAGCTGGCTTTGGGTTCAGCGGAGTGGATAAGAATGGGAATTTCTGTTGGGATCT
GCTTTCGAACCTAAACATCTGGAAAATTGAGACTGCCACAAGTTTCAAAATGTACTTGGAAAACTGGAAT
ATTCAGACAGCTACTTGGCTAAAGTGTGTGTGCTATCAGCGGGTTCCATGGTACCCCACGGTGCTAACCT
TCATCCTGTCTGCTTTGTGGCATGGTGTCTACCCTGGATACTATTTTACCTTCTTAACTGGAATTCTTGT
CACATTAGCAGCTAGAGCGGTCAGGAACAACTACAGACATTACTTCCTTTCTTCAAGAGCTCTCAAGGCT
GTGTATGATGCAGGCACCTGGGCCGTCACTCAGCTGGCTGTCTCTTACACGGTAGCACCCTTTGTGATGT
TGGCAGTTGAACCGACCATCAGCTTATACAAGTCCATGTACTTTTATTTGCACATCATAAGTCTCCTGAT
AATACTATTTCTGCCAATGAAACCACAAGCTCATACGCAAAGGCGGCCTCAGACTCTGAACTCTATTAAT
AAGAGAAAAACAGATTGA

Translation (495 aa):
MAAEPQPSSLSYRTTGSTYLHPLSELLGIPLDQVNFVVCQLVALFAAFWFRIYLRPGTTSSDVRHAVATI
FGIYFVIFCFGWYSVHLFVLVLMCYAIMVTASVSNIHRYSFFVAMGYLTICHISRIYIFHYGILTTDFSG
PLMIVTQKITTLAFQVHDGLGRRAEDLSAEQHRLAIKVKPSFLEYLSYLLNFMSVIAGPCNNFKDYIAFI
EGKHIHMKLLEVNWKRKGFHSLPEPSPTGAVIHKLGITLVSLLLFLTLTKTFPVTCLVDDWFVHKASFPA
RLCYLYVVMQASKPKYYFAWTLADAVNNAAGFGFSGVDKNGNFCWDLLSNLNIWKIETATSFKMYLENWN
IQTATWLKCVCYQRVPWYPTVLTFILSALWHGVYPGYYFTFLTGILVTLAARAVRNNYRHYFLSSRALKA
VYDAGTWAVTQLAVSYTVAPFVMLAVEPTISLYKSMYFYLHIISLLIILFLPMKPQAHTQRRPQTLNSIN
KRKTD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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