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Report for CCDS33723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33723.1 Public Homo sapiens 3 ZCWPW2 24 110 108 CCDS HistoryNCBI Gene:152098Re-query CCDS DB by CCDS ID:33723.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 33723.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383768.7 ENSP00000373278.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000383768.7Link to Ensembl Protein Viewer:ENSP00000373278.2Re-query CCDS DB by Nucleotide ID:ENST00000383768Re-query CCDS DB by Protein ID:ENSP00000373278
Original member Current member NCBI NM_001040432.4 NP_001035522.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001040432.4Link to Protein Sequence:NP_001035522.1Re-query CCDS DB by Nucleotide ID:NM_001040432Re-query CCDS DB by Protein ID:NP_001035522Link to BLAST:NP_001035522.1
Original member Current member NCBI NM_001324169.2 NP_001311098.1 Accepted alive Link to Nucleotide Sequence:NM_001324169.2Link to Protein Sequence:NP_001311098.1Re-query CCDS DB by Nucleotide ID:NM_001324169Re-query CCDS DB by Protein ID:NP_001311098Link to BLAST:NP_001311098.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035522.1 356 Q504Y3 356 100% 0 0
NP_001311098.1 356 Q504Y3 356 100% 0 0

Chromosomal Locations for CCDS 33723.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 28413069 28413400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 28435110 28435269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 28478814 28478931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 28492127 28492173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 28514064 28514122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 28515554 28515621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 28520992 28521116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 28524527 28524688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1071 nt):
ATGGATAAAGAAAAATTGGATGTTAAGATTGAATATTGTAACTATGCAATGGATTCCTCAGTGGAAAACA
TGTATGTAAACAAAGTGTGGGTTCAATGTGAGAATGAAAATTGTTTGAAATGGAGATTGTTATCAAGTGA
GGATTCAGCCAAGGTTGATCATGATGAACCATGGTACTGCTTCATGAACACTGATTCAAGATATAATAAC
TGCTCAATTTCTGAAGAAGACTTCCCTGAAGAGTCTCAGCTTCATCAGTGTGGATTTAAGATTGTCTATT
CACAGCTCCCTCTTGGAAGCCTGGTTTTGGTAAAATTACAGAATTGGCCAAGTTGGCCAGGAATACTTTG
CCCTGACCGTTTTAAAGGGAAATATGTAACTTATGACCCGGATGGAAATGTTGAAGAGTATCACATAGAA
TTCCTGGGCGATCCCCATTCAAGATCATGGATAAAGGCAACATTCGTTGGACATTATAGTATCACATTAA
AGCCAGAAAAGTGTAAGAATAAAAAGAAGTGGTATAAAAGTGCACTACAAGAAGCATGTCTACTCTATGG
ATATTCTCATGAGCAAAGACTGGAAATGTGCTGCCTATCAAAACTACAAGATAAATCCGAAACACATGAC
AAAGTTGCTGCACTGGTCAAGAAAAGGAAGCAGACTTCTAAAAATAATATTGAAAAGAAGAAGCCCAAAT
TTAGAAAAAGGAAAAGGAAAGCAATTTTAAAATGCTCTTTTGAAAATGTTTATTCTGATGATGCCTTATC
AAAGGAGAACAGGGTTGTCTGTGAGACGGAAGTTTTACTAAAAGAGCTGGAGCAAATGCTGCAGCAAGCA
CTGCAACCCACAGCCACACCTGATGAATCAGAAGAAGGACATGGAGAGGAAATAAATATGGGAGAAAAGT
TATCTAAATGCAGCCCAGAAGCTCCTGCAGGCAGTCTGTTTGAAAACCACTATGAAGAGGACTATCTTGT
AATTGATGGGATAAAATTAAAAGCTGGAGAATGTATTGAGGATATAACTAATAAATTTAAAGAAATAGAT
GCTTTGATGTCTGAGTTTTAG

Translation (356 aa):
MDKEKLDVKIEYCNYAMDSSVENMYVNKVWVQCENENCLKWRLLSSEDSAKVDHDEPWYCFMNTDSRYNN
CSISEEDFPEESQLHQCGFKIVYSQLPLGSLVLVKLQNWPSWPGILCPDRFKGKYVTYDPDGNVEEYHIE
FLGDPHSRSWIKATFVGHYSITLKPEKCKNKKKWYKSALQEACLLYGYSHEQRLEMCCLSKLQDKSETHD
KVAALVKKRKQTSKNNIEKKKPKFRKRKRKAILKCSFENVYSDDALSKENRVVCETEVLLKELEQMLQQA
LQPTATPDESEEGHGEEINMGEKLSKCSPEAPAGSLFENHYEEDYLVIDGIKLKAGECIEDITNKFKEID
ALMSEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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