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Report for CCDS33348.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33348.1 Public Homo sapiens 2 ZSWIM2 24 110 108 CCDS HistoryNCBI Gene:151112Re-query CCDS DB by CCDS ID:33348.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33348.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295131.3 ENSP00000295131.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295131.3Link to Ensembl Protein Viewer:ENSP00000295131.2Re-query CCDS DB by Nucleotide ID:ENST00000295131Re-query CCDS DB by Protein ID:ENSP00000295131
Original member Current member NCBI NM_182521.3 NP_872327.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182521.3Link to Protein Sequence:NP_872327.2Re-query CCDS DB by Nucleotide ID:NM_182521Re-query CCDS DB by Protein ID:NP_872327Link to BLAST:NP_872327.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872327.2 633 Q8NEG5 633 100% 0 0

Chromosomal Locations for CCDS 33348.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 186827984 186828790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186829727 186829880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186833120 186833232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186833946 186834030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186837306 186837554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186838959 186839169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186844717 186844757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186847719 186847795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 186848966 186849130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1902 nt):
ATGCTTCGCCGAGGCTATAAGGCCTCTGAAAGGCGAAGACACTTGAGCGAGAGGCTCAGCTGGCACCAAG
ACCAGGCGCTGAGTAGCAGCATCTACCTCCTACGAGAGATGGGCCCCACTGGCTTCCTGCTGAGGGAGGA
GGAGCCGGAATACATGGATTTCCGAGTTTTTCTAGGAAATCCTCACGTTTGTAACTGTTCCACATTTCCG
AAAGGAGGGGAACTTTGTAAGCATATCTGCTGGGTCTTGTTGAAAAAATTCAAGCTTCCAAGGAACCATG
AATCTGCTTTACAACTGGGTCTTGGAGAAAGAGAGATAAGTGACTTGCTTCGGGGGATACATCGAGTTCA
AACTCCCCAACCAGGAACAAATGACGAAAATGAACATGTTGAAGAAGATGGGTACATTAAACAGAAGGAA
ATTGATTCAGAGGATATCTGCTCTATTTGTCAAGAGCTACTTTTAGAGAAAAAGCTTCCTGTCACCTTTT
GCAGGTTTGGCTGTGGCAATAGTATTCATATAAAATGCATGAAGATCTTAGCTAATTATCAGAGTACATC
AAACACTTCCATGTTGAAATGTCCTCTGTGCAGGAAAGAGTTTGCACCATTAAAACTGATTTTGGAGGAA
TTCAAAAACTCTAGCAAACTAGTAGCTGCAGCAGAAAAAGAGAGACTGGACAAACACCTTGGGATTCCCT
GTAATAACTGCAAACAGTTTCCAATTGAGGGGAAGTGTTATAAGTGTACCGAATGCATAGAATATCACTT
ATGCCAGGAATGTTTTGATAGCTGCTGCCATCTTTCCCACACGTTTACATTTCGTGAGAAAAGAAACCAA
AAATGGAGATCACTAGAAAAAAGAGCAGATGAAGTTGTAAAATACATAGATACTAAAAATGAGATTGAAG
AAAAGATGTCACATTTTCAAGAAAAGCAAGGCCAAGTTTACACACCAAAACACATTGTAAGATCACTGCC
TCTCCAACTGATTACTAAGAATAGTAAGCTGCTTGCTCCAGGCTACCAGTGTCTACTTTGTTTGAAGGCA
TTTCATCTTGGTCAACATACAAGATTGCTACCATGTACTCACAAGTTTCACAGGAAGTGTATTGACAACT
GGTTATTCCACAAGTGCAATTCATGCCCTATTGATGGACAAGTTATATATAACCCTTTAACTTGGAAAAA
TTCAGCAGTGAATGGACAAGCACATCAGTCTGTTTCAAACAGAGACATCATTCATCTATCAAAGCAGAAA
GAACCAGATCTTTTTATTCCTGGTACTGGATTAGTCTTAAAACAAAATAGACTTGGAATTTTACCTAGCA
TACCTCAGTGTAATTTTGATGAATTGAATACACCTCAAAGCCCAAAAGATGCCTATGAAAATACAACAAT
AGATAATCTATGCTCTATCAAATTAGATAATTCAAATTCAAAAAAATTAACCTATGATTATAAAATTAGC
CAACATTTTCCCAGGTATCTTCAAGATTTACCCACTGTGTCATTTGGGAAAATACCATCTCAAACACTGC
TTCCTCCTATTGTTCATAAGAATATTGTGTGTCCCACTGCAATGGAAAGTCCATGCATCAGTGGAAAATT
TCACACTAGTCTAAGCCGGATGACCAAAGGCTGTAAATGTAATAACCACAACCTAAAGAAGACTCCTGCC
ACTAAAATAAGAGAGGACAACAAGAGATCAACTTTACTTCCAGAGGATTTCAATCTTATTGTCAATTGGA
GCACAGCTAAACTTAGTTTGTCTAAAAGGTATAGTAACTGTATGGGGGAAATTACACGAAAATGTAGTCA
TCTATCAAGACAGCCTGTGTCTCACTCTGTAAATACAAAAAGTACTGAGCTATCTTTAATAATAGAAGGA
GTTCAATTGTGA

Translation (633 aa):
MLRRGYKASERRRHLSERLSWHQDQALSSSIYLLREMGPTGFLLREEEPEYMDFRVFLGNPHVCNCSTFP
KGGELCKHICWVLLKKFKLPRNHESALQLGLGEREISDLLRGIHRVQTPQPGTNDENEHVEEDGYIKQKE
IDSEDICSICQELLLEKKLPVTFCRFGCGNSIHIKCMKILANYQSTSNTSMLKCPLCRKEFAPLKLILEE
FKNSSKLVAAAEKERLDKHLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSCCHLSHTFTFREKRNQ
KWRSLEKRADEVVKYIDTKNEIEEKMSHFQEKQGQVYTPKHIVRSLPLQLITKNSKLLAPGYQCLLCLKA
FHLGQHTRLLPCTHKFHRKCIDNWLFHKCNSCPIDGQVIYNPLTWKNSAVNGQAHQSVSNRDIIHLSKQK
EPDLFIPGTGLVLKQNRLGILPSIPQCNFDELNTPQSPKDAYENTTIDNLCSIKLDNSNSKKLTYDYKIS
QHFPRYLQDLPTVSFGKIPSQTLLPPIVHKNIVCPTAMESPCISGKFHTSLSRMTKGCKCNNHNLKKTPA
TKIREDNKRSTLLPEDFNLIVNWSTAKLSLSKRYSNCMGEITRKCSHLSRQPVSHSVNTKSTELSLIIEG
VQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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