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Report for CCDS2096.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2096.1 Public Homo sapiens 2 TTL 24 110 108 CCDS HistoryNCBI Gene:150465Re-query CCDS DB by CCDS ID:2096.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2096.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000233336.7 ENSP00000233336.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000233336.7Link to Ensembl Protein Viewer:ENSP00000233336.5Re-query CCDS DB by Nucleotide ID:ENST00000233336Re-query CCDS DB by Protein ID:ENSP00000233336
Original member Current member NCBI NM_153712.5 NP_714923.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153712.5Link to Protein Sequence:NP_714923.1Re-query CCDS DB by Nucleotide ID:NM_153712Re-query CCDS DB by Protein ID:NP_714923Link to BLAST:NP_714923.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_714923.1 377 Q8NG68 377 100% 0 0

Chromosomal Locations for CCDS 2096.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 112482345 112482501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112485917 112485995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112494143 112494375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112501206 112501341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112502912 112503181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112520282 112520425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 112528681 112528795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGTACACCTTCGTGGTACGCGATGAGAACAGCAGCGTCTACGCCGAGGTCTCCCGGCTGCTCCTCGCCA
CCGGCCACTGGAAGAGGCTGCGGCGAGACAACCCCAGATTCAACCTGATGCTGGGAGAGAGGAATCGGCT
GCCCTTCGGGAGACTGGGTCACGAGCCCGGGCTGGTACAGTTGGTGAATTACTACAGGGGTGCTGACAAA
CTGTGTCGCAAAGCTTCTTTAGTGAAGCTAATCAAGACAAGCCCTGAACTGGCTGAGTCCTGCACATGGT
TCCCTGAATCTTATGTGATTTATCCAACCAATCTCAAGACTCCAGTTGCTCCAGCACAGAATGGAATTCA
GCCACCAATCAGTAACTCAAGGACAGATGAAAGAGAATTCTTTCTCGCCTCTTATAACAGAAAGAAAGAG
GATGGAGAGGGCAACGTTTGGATTGCAAAGTCATCAGCCGGTGCCAAAGGTGAAGGCATTCTCATCTCCT
CAGAGGCTTCAGAGCTTCTCGATTTCATAGACAACCAGGGCCAAGTGCACGTGATCCAGAAATATCTTGA
GCACCCTCTGCTGCTTGAGCCAGGTCATCGCAAGTTTGACATCCGAAGCTGGGTCTTGGTGGATCATCAG
TATAATATCTACCTCTATAGAGAGGGTGTGCTTCGGACTGCTTCAGAACCATATCATGTTGATAATTTCC
AAGACAAAACCTGCCATTTGACCAATCACTGCATTCAAAAAGAGTATTCAAAGAACTACGGGAAGTATGA
AGAAGGAAATGAAATGTTCTTCAAGGAGTTCAATCAGTACCTAACAAGTGCTTTGAACATTACCCTAGAA
AGTAGTATCTTACTACAAATCAAACATATAATAAGGAACTGCCTCCTGAGCGTGGAGCCTGCCATTAGCA
CCAAGCACCTCCCTTACCAGAGCTTCCAGCTCTTCGGCTTTGACTTCATGGTCGATGAGGAGCTGAAGGT
GTGGCTCATTGAGGTCAACGGTGCCCCTGCATGTGCTCAGAAGCTCTATGCAGAACTGTGCCAAGGCATC
GTGGACATAGCCATTTCCAGTGTCTTCCCACCCCCAGATGTGGAGCAACCTCAGACCCAGCCAGCTGCCT
TCATCAAGCTGTGA

Translation (377 aa):
MYTFVVRDENSSVYAEVSRLLLATGHWKRLRRDNPRFNLMLGERNRLPFGRLGHEPGLVQLVNYYRGADK
LCRKASLVKLIKTSPELAESCTWFPESYVIYPTNLKTPVAPAQNGIQPPISNSRTDEREFFLASYNRKKE
DGEGNVWIAKSSAGAKGEGILISSEASELLDFIDNQGQVHVIQKYLEHPLLLEPGHRKFDIRSWVLVDHQ
YNIYLYREGVLRTASEPYHVDNFQDKTCHLTNHCIQKEYSKNYGKYEEGNEMFFKEFNQYLTSALNITLE
SSILLQIKHIIRNCLLSVEPAISTKHLPYQSFQLFGFDFMVDEELKVWLIEVNGAPACAQKLYAELCQGI
VDIAISSVFPPPDVEQPQTQPAAFIKL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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