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Report for CCDS94348.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94348.1 Public Homo sapiens 8 C8orf90 24 110 108 CCDS HistoryNCBI Gene:122455339Re-query CCDS DB by CCDS ID:94348.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94348.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000643770.2 ENSP00000493548.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000643770.2Link to Ensembl Protein Viewer:ENSP00000493548.1Re-query CCDS DB by Nucleotide ID:ENST00000643770Re-query CCDS DB by Protein ID:ENSP00000493548
Original member Current member NCBI NM_001395960.1 NP_001382889.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395960.1Link to Protein Sequence:NP_001382889.1Re-query CCDS DB by Nucleotide ID:NM_001395960Re-query CCDS DB by Protein ID:NP_001382889Link to BLAST:NP_001382889.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001382889.1 192 A0A2R8Y2Y2 192 100% 0 0

Chromosomal Locations for CCDS 94348.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 141514697 141514775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 141518216 141518715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGGCCTCCTCTTGTCCTGGGACCCCCAGCCCAGCAGGTCTGCCCCCTCCTTCTGTAGCCACTCCAGGCG
AGACACTTGGTCCCGCGGCGCCCCCGGAGCCCGCCTTCCCGGACATCTACGGCGGGGACGCGCAGCTCTG
GGAGGCGCATTTCCGCGGCATCGGGCGCGCCTACCGCGCGCTGGGCAAGCAGGACGACTTCGCCATCCGC
GTGCTCACCGAGAACTTCACGCTGCCCTTCCCGTTCGCCTGGCCGCCGGGGTCCGACCCCGCCTGCGGGC
CGCTCTTCTACGACCCCCGCGACCGCGCAGACTTCGACTTCCTGCTGCGCGGCCCCGGAGCTTCGCCCCC
AGCGCTGCTGCGGCCCCTGCACGCCACGGCCCAGGCAGCGATGCGCAAGCGGCGCCTGGAGCGGCTGGCC
CTGAGCTGCGCCCGCGCGCGGGGCCCGGGCCCGGCCTCGTCCTGCTGCTGCCCGGCCCCGCCGCCGCCTT
CCCGGAGCCCGAGGCCAGCGCTTCCAGCGACGGCACCCCCAGGCTGGCCCAGGCCCCGCCGCTGCCCCGA
GAGCGAACAGAATAAATAA

Translation (192 aa):
MASSCPGTPSPAGLPPPSVATPGETLGPAAPPEPAFPDIYGGDAQLWEAHFRGIGRAYRALGKQDDFAIR
VLTENFTLPFPFAWPPGSDPACGPLFYDPRDRADFDFLLRGPGASPPALLRPLHATAQAAMRKRRLERLA
LSCARARGPGPASSCCCPAPPPPSRSPRPALPATAPPGWPRPRRCPESEQNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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