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Report for CCDS31485.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31485.1 Public Homo sapiens 11 OR4B1 24 110 108 CCDS HistoryNCBI Gene:119765Re-query CCDS DB by CCDS ID:31485.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31485.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309562.3 ENSP00000311605.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309562.3Link to Ensembl Protein Viewer:ENSP00000311605.2Re-query CCDS DB by Nucleotide ID:ENST00000309562Re-query CCDS DB by Protein ID:ENSP00000311605
Original member Current member NCBI NM_001005470.1 NP_001005470.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005470.1Link to Protein Sequence:NP_001005470.1Re-query CCDS DB by Nucleotide ID:NM_001005470Re-query CCDS DB by Protein ID:NP_001005470Link to BLAST:NP_001005470.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005470.1 309 Q8NGF8 309 100% 0 0

Chromosomal Locations for CCDS 31485.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 48216810 48217739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGCCAGTACAAGTAATGTGACTGAGTTGATTTTCACTGGCCTTTTCCAGGATCCAGCTGTGCAGAGTG
TATGCTTTGTGGTGTTTCTCCCCGTGTACCTTGCCACGGTGGTGGGCAATGGCCTCATCGTTCTGACGGT
CAGTATCAGCAAGAGTCTGGATTCTCCCATGTACTTCTTCCTTAGCTGCCTGTCCTTGGTGGAGATCAGT
TATTCCTCCACTATCGCCCCTAAATTCATCATAGACTTACTTGCCAAGATTAAAACCATCTCTCTGGAAG
GCTGTCTGACTCAGATATTCTTCTTCCACTTCTTTGGGGTTGCTGAGATCCTTTTGATTGTGGTGATGGC
CTATGATTGCTACGTGGCCATTTGCAAGCCTCTTCATTATATGAACATTATCAGTCGTCAACTGTGTCAC
CTTCTGGTGGCTGGTTCCTGGCTGGGGGGCTTTTGTCACTCCATAATTCAGATTCTCGTTATCATCCAAT
TGCCCTTCTGTGGTCCCAATGTGATTGACCACTATTTCTGTGACCTCCAGCCTTTATTCAAGCTTGCCTG
CACTGACACCTTCATGGAGGGGGTTATTGTGTTGGCCAACAGTGGATTATTCTCTGTCTTCTCCTTCCTC
ATCTTGGTGTCCTCTTATATTGTCATTCTGGTCAACTTGAGGAACCATTCTGCAGAGGGGAGGCACAAAG
CCCTCTCCACCTGTGCTTCTCACATCACAGTGGTCATCTTGTTTTTTGGACCTGCTATCTTCCTCTACAT
GCGACCTTCTTCCACTTTCACTGAAGATAAACTTGTGGCTGTATTCTACACGGTCATCACCCCCATGCTG
AACCCCATCATTTACACACTCAGGAATGCAGAGGTGAAAATCGCCATAAGAAGATTGTGGAGCAAAAAGG
AGAATCCAGGGAGGGAGTGA

Translation (309 aa):
MASTSNVTELIFTGLFQDPAVQSVCFVVFLPVYLATVVGNGLIVLTVSISKSLDSPMYFFLSCLSLVEIS
YSSTIAPKFIIDLLAKIKTISLEGCLTQIFFFHFFGVAEILLIVVMAYDCYVAICKPLHYMNIISRQLCH
LLVAGSWLGGFCHSIIQILVIIQLPFCGPNVIDHYFCDLQPLFKLACTDTFMEGVIVLANSGLFSVFSFL
ILVSSYIVILVNLRNHSAEGRHKALSTCASHITVVILFFGPAIFLYMRPSSTFTEDKLVAVFYTVITPML
NPIIYTLRNAEVKIAIRRLWSKKENPGRE


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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