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Report for CCDS46030.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46030.1 Public Homo sapiens 19 ZNF257 24 110 108 CCDS HistoryNCBI Gene:113835Re-query CCDS DB by CCDS ID:46030.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46030.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000594947.6 ENSP00000470209.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000594947.6Link to Ensembl Protein Viewer:ENSP00000470209.1Re-query CCDS DB by Nucleotide ID:ENST00000594947Re-query CCDS DB by Protein ID:ENSP00000470209
Original member Current member NCBI NM_033468.4 NP_258429.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033468.4Link to Protein Sequence:NP_258429.2Re-query CCDS DB by Nucleotide ID:NM_033468Re-query CCDS DB by Protein ID:NP_258429Link to BLAST:NP_258429.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_258429.2 563 Q9Y2Q1-1 563 100% 0 0

Chromosomal Locations for CCDS 46030.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 22052633 22052635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 22072809 22072935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 22073469 22073564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 22087977 22089442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1692 nt):
ATGGGACCACTGACAATTAGGGATGTGACTGTAGAATTCTCTCTGGAGGAGTGGCATTGCCTGGACACTG
CA
CAGCAGAATTTATATAGGGATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGT
C
TCTAAGCCAGACCTGATCACCTGTCTGGAGCAAGGAAAAGAGCCCTGTAATATGAAGAGACATGAGATG
GTA
GCCAAACCCCCAGTTATGTGTTCTCATATTGCTGAAGACCTTTGCCCAGAGCGAGACATAAAATATT
TT
TTCCAAAAAGTCATACTGAGGAGATATGATAAATGTGAACATGAGAATTTACAATTAAGAAAGGGCTG
T
AAAAGTGTGGATGAGTGTAAGGTGTGCAAAGGAGGTTATAATGGACTTAACCAATGTCTGATAACTACC
CAG
AGCAAAATGTATCAATGTGATAAATATGTAAAAGTCTTCTATAAGTTTTCAAATTCAGATAGACATA
AG
ATAAGACATACTGAAAAGAAAACTTGCAAATGTAAAGAATGTGGCAAATCATTTTGCATGCTTTCACA
A
CTAACTCGACATAAGAGAATTCATATTAGAGAGAATTCCCACAAATGTGAAGAATGTGGCAAAGCCTTT
AAC
CAGTCCTCAGCTCTTACTCGACATAAGATGACTCATACTGGAGAGAAACCCTACAAATGTGAAGAGT
GT
GGAAAAGCTTTTAACCGGTCTTCACACCTTACTCAACATAAGGTAATTCATACTAGAGAGAAACCCTA
C
AAATGTGAAGAGTGTGGCAAAGCCTTTAACCGGTCTTCACACATTACTCAACATAAGAGAATTCATAAT
AGA
GAGAAGCCCTTCAAATATGATGAATGTTGCAAAGCCTTTAAGTGGTCCTCAGCTCTTACTACCCTTA
CT
CAACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAGTGTGGCAAAGCCTTTAACCA
G
TCCTCAGCCCTTACTCGACATAAGATGATTCATACTGGAGAGAAACCCTTCCAATGTGAAGAGTGTGGC
AAA
GCTTTTAACCGGTCTTCACACCTTACTCAACATAAGATAATTCATACTAAAGAGAAACCCTACAAAT
GT
GAAGAGTGTGGAAAAGCCTTTAACCGGTCTTCACACCTTACTAAACATAAGAGAATTCATACTAGAGA
G
AAGGCCTACAAATGTGATGAATATTGCAAAGCTTTTAACTGGTCCTCAGCTCTTACTACCCTTACTCAG
CAT
AAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAGTGTGGCAAAGCCTTTAACCGGTCTT
CA
TACCTTATTCGACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAGTGTGGCAAAGC
C
TTTAACCAGTCTTCACACCTTACTCAACATAAAATAATTCATACTGGGGAGAAGCCCTACAAATGTGAA
GAA
TGTGGCAAAGCCTTTAACCGGTCTTCACACCTTTCTCAACATAAGATAATTCATACTGGAGAGAAAC
CC
TACAAATGTGAAGAATGTGGCAAGCCTTTTAATCGTTTCTCATACCTTACCGTACATAAGAGAATTCA
T
GCTGGAGAGAACCCCAACAAATATGAAGAATGTGGCAAAGCTTGTAACCATTCCTCAAACCTTACTAAA
CAT
AATTCATAA


Translation (563 aa):
MGPLTIRDVTVEFSLEEWHCLDTAQQNLYRDVMLENYRNLVFLGIAVSKPDLITCLEQGKEPCNMKRHEM
V
AKPP
VMCSHIAEDLCPERDIKYFFQKVILRRYDKCEHENLQLRKGCKSVDECKVCKGGYNGLNQCLITT
Q
SKMYQCDKYVKVFYKFSNSDRHKIRHTEKKTCKCKECGKSFCMLSQLTRHKRIHIRENSHKCEECGKAF
N
QSSALTRHKMTHTGEKPYKCEECGKAFNRSSHLTQHKVIHTREKPYKCEECGKAFNRSSHITQHKRIHN
R
EKPFKYDECCKAFKWSSALTTLTQHKRIHTGEKPYKCEECGKAFNQSSALTRHKMIHTGEKPFQCEECG
K
AFNRSSHLTQHKIIHTKEKPYKCEECGKAFNRSSHLTKHKRIHTREKAYKCDEYCKAFNWSSALTTLTQ
H
KIIHTGEKPYKCEECGKAFNRSSYLIRHKIIHTGEKPYKCEECGKAFNQSSHLTQHKIIHTGEKPYKCE
E
CGKAFNRSSHLSQHKIIHTGEKPYKCEECGKPFNRFSYLTVHKRIHAGENPNKYEECGKACNHSSNLTK
H
NS




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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