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Report for CCDS77246.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77246.1 Public Homo sapiens 19 MISP3 24 110 108 CCDS HistoryNCBI Gene:113230Re-query CCDS DB by CCDS ID:77246.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77246.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587086.3 ENSP00000465157.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000587086.3Link to Ensembl Protein Viewer:ENSP00000465157.1Re-query CCDS DB by Nucleotide ID:ENST00000587086Re-query CCDS DB by Protein ID:ENSP00000465157
Original member Current member NCBI NM_001291291.2 NP_001278220.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001291291.2Link to Protein Sequence:NP_001278220.1Re-query CCDS DB by Nucleotide ID:NM_001291291Re-query CCDS DB by Protein ID:NP_001278220Link to BLAST:NP_001278220.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278220.1 219 Q96FF7 219 100% 0 0

Chromosomal Locations for CCDS 77246.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 14073310 14073877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14074390 14074463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14074706 14074723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (660 nt):
ATGGAGACGCCCATCGAGCGCGAAATCCGCCGCAGCTGCGAACGCGAGGAGAGCCTGCGCCGGAGCCGGG
GCCTGAGCCCGGGCCGCGCAGGCCGTGAACTCGTCGAGCTGCGCGTGCGGCCGGTGCTCAACCTGCCGGG
TCCTGGCCCCGCGCTCCCGCGCGCCCTGGAGCGGGCGCGGGCGGGCGCGCAGATGCAGCGGGACATCGAG
CGGGAGGCCCACCGGCAGGCGGCGCTGGCGCGCCCCGCGGTCCCCGAGCCGCGCGCCCGGTCGCCGCCGC
AGCCGCTGGGCGAACTCAAGCGCTTCTTCGAGGCCGCGGCGGGGAGCGGCTCCTCGGCGGGGGCGGGGGA
CGGCGCGGGCCCGCAGAGGCTGCCAGAGCCTGGGGGACGGCCGCGCTCGGCCGTGCAGGGCGGGTGCCGG
GTGCTGGGCAGCGCCCCGCCGCCTTTCACTCCGTCACTGCTGGAGCAGGAGGTGCGCGCCGTGCGCGAGC
GCGAGCAGGAACTGCAGCGCCAGCGGCGCAGCGTCTATGGCACCGCGGAGTTCAAGGAGCCTACGCCGAG
CCTCACCGCGAGCAGGGGCGACGGAAAGTTGGTGGTGATCTGGCCCCCCCGCAGAAAGGTCTCGGAGAAC
GGCCTGGAGCAGGAGGAGCGCAAACCTTGA

Translation (219 aa):
METPIEREIRRSCEREESLRRSRGLSPGRAGRELVELRVRPVLNLPGPGPALPRALERARAGAQMQRDIE
REAHRQAALARPAVPEPRARSPPQPLGELKRFFEAAAGSGSSAGAGDGAGPQRLPEPGGRPRSAVQGGCR
VLGSAPPPFTPSLLEQEVRAVREREQELQRQRRSVYGTAEFKEPTPSLTASRGDGKLVVIWPPRRKVSEN
GLEQEERKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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