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Report for CCDS41809.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41809.1 Public Homo sapiens 12 FRS2 24 110 108 CCDS HistoryNCBI Gene:10818Re-query CCDS DB by CCDS ID:41809.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41809.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397997.6 ENSP00000381083.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397997.6Link to Ensembl Protein Viewer:ENSP00000381083.2Re-query CCDS DB by Nucleotide ID:ENST00000397997Re-query CCDS DB by Protein ID:ENSP00000381083
Original member Current member EBI ENST00000550389.5 ENSP00000447241.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000550389.5Link to Ensembl Protein Viewer:ENSP00000447241.1Re-query CCDS DB by Nucleotide ID:ENST00000550389Re-query CCDS DB by Protein ID:ENSP00000447241
Original member Current member EBI ENST00000549921.6 ENSP00000450048.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000549921.6Link to Ensembl Protein Viewer:ENSP00000450048.1Re-query CCDS DB by Nucleotide ID:ENST00000549921Re-query CCDS DB by Protein ID:ENSP00000450048
Original member Current member NCBI NM_001042555.3 NP_001036020.1 Accepted alive Link to Nucleotide Sequence:NM_001042555.3Link to Protein Sequence:NP_001036020.1Re-query CCDS DB by Nucleotide ID:NM_001042555Re-query CCDS DB by Protein ID:NP_001036020Link to BLAST:NP_001036020.1
Original member Current member NCBI NM_001278351.2 NP_001265280.1 Accepted alive Link to Nucleotide Sequence:NM_001278351.2Link to Protein Sequence:NP_001265280.1Re-query CCDS DB by Nucleotide ID:NM_001278351Re-query CCDS DB by Protein ID:NP_001265280Link to BLAST:NP_001265280.1
Original member Current member NCBI NM_001278353.2 NP_001265282.1 Accepted alive Link to Nucleotide Sequence:NM_001278353.2Link to Protein Sequence:NP_001265282.1Re-query CCDS DB by Nucleotide ID:NM_001278353Re-query CCDS DB by Protein ID:NP_001265282Link to BLAST:NP_001265282.1
Original member Current member NCBI NM_001278354.2 NP_001265283.1 Accepted alive Link to Nucleotide Sequence:NM_001278354.2Link to Protein Sequence:NP_001265283.1Re-query CCDS DB by Nucleotide ID:NM_001278354Re-query CCDS DB by Protein ID:NP_001265283Link to BLAST:NP_001265283.1
Original member Current member NCBI NM_001278355.2 NP_001265284.1 Accepted alive Link to Nucleotide Sequence:NM_001278355.2Link to Protein Sequence:NP_001265284.1Re-query CCDS DB by Nucleotide ID:NM_001278355Re-query CCDS DB by Protein ID:NP_001265284Link to BLAST:NP_001265284.1
Original member Current member NCBI NM_001278356.2 NP_001265285.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001278356.2Link to Protein Sequence:NP_001265285.1Re-query CCDS DB by Nucleotide ID:NM_001278356Re-query CCDS DB by Protein ID:NP_001265285Link to BLAST:NP_001265285.1
Original member Current member NCBI NM_001278357.2 NP_001265286.1 Accepted alive Link to Nucleotide Sequence:NM_001278357.2Link to Protein Sequence:NP_001265286.1Re-query CCDS DB by Nucleotide ID:NM_001278357Re-query CCDS DB by Protein ID:NP_001265286Link to BLAST:NP_001265286.1
Original member Current member NCBI NM_006654.5 NP_006645.3 Accepted alive Link to Nucleotide Sequence:NM_006654.5Link to Protein Sequence:NP_006645.3Re-query CCDS DB by Nucleotide ID:NM_006654Re-query CCDS DB by Protein ID:NP_006645Link to BLAST:NP_006645.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036020.1 508 Q8WU20 508 100% 0 0
NP_001265280.1 508 Q8WU20 508 100% 0 0
NP_001265282.1 508 Q8WU20 508 100% 0 0
NP_001265283.1 508 Q8WU20 508 100% 0 0
NP_001265284.1 508 Q8WU20 508 100% 0 0
NP_001265285.1 508 Q8WU20 508 100% 0 0
NP_001265286.1 508 Q8WU20 508 100% 0 0
NP_006645.3 508 Q8WU20 508 100% 0 0

Chromosomal Locations for CCDS 41809.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 69569031 69569096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69570331 69570517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69571276 69571434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69572118 69572281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69574005 69574955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1527 nt):
ATGGGTAGCTGTTGTAGCTGTCCAGATAAAGACACTGTCCCAGATAACCATCGGAACAAGTTTAAGGTCA
TTAATGTGGATGATGATGGGAATGAGTTAGGTTCTGGCATAATGGAACTTACAGACACAGAACTGATTTT
ATACACCCGCAAACGTGACTCAGTAAAATGGCACTACCTCTGCCTGCGACGCTATGGCTATGACTCGAAT
CTCTTTTCTTTTGAAAGTGGTCGAAGGTGTCAAACTGGACAAGGAATCTTTGCCTTTAAGTGTGCCCGTG
CAGAAGAATTATTTAACATGTTGCAAGAGATTATGCAAAATAATAGTATAAATGTGGTGGAAGAGCCAGT
TGTAGAAAGAAATAATCATCAGACAGAATTGGAAGTCCCTAGAACACCTCGAACACCTACAACTCCAGGA
TTTGCTGCTCAGAACTTACCTAATGGATATCCCCGATATCCCTCATTTGGAGATGCTTCATCCCATCCGT
CAAGCAGACATCCTTCTGTGGGAAGTGCTCGCCTGCCTTCAGTAGGGGAAGAATCTACACATCCTTTGCT
TGTGGCTGAGGAACAAGTACATACCTATGTCAACACTACAGGTGTGCAAGAAGAGCGGAAAAACCGCACA
AGTGTGCATGTTCCATTGGAGGCGAGGGTTTCTAACGCTGAAAGCAGCACACCAAAAGAAGAACCAAGTA
GTATTGAGGACAGGGATCCTCAGATTCTTCTTGAACCTGAAGGAGTCAAATTTGTTTTAGGGCCAACCCC
TGTTCAAAAGCAGTTAATGGAAAAAGAGAAACTGGAGCAACTTGGAAGAGATCAAGTTAGTGGAAGTGGA
GCAAATAACACAGAATGGGACACTGGCTATGACAGTGATGAACGAAGAGATGCACCCTCTGTTAACAAAC
TGGTGTATGAAAATATAAATGGGCTATCTATCCCTAGTGCCTCAGGGGTCAGGAGAGGTCGTCTGACATC
CACCAGTACCTCAGATACCCAGAATATCAACAACTCAGCTCAGAGAAGAACTGCATTATTAAACTATGAA
AATCTACCATCTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATGAAGATGACAATTTAGGAC
CAAAGACCCCATCTCTAAATGGCTACCATAATAATCTAGATCCAATGCATAACTATGTAAATACAGAGAA
TGTAACAGTGCCAGCAAGTGCTCACAAAATAGAATATTCAAGGCGTCGGGACTGTACACCAACAGTCTTT
AACTTTGATATCAGACGCCCAAGTTTAGAACACAGGCAGCTTAATTACATACAGGTTGACTTGGAAGGTG
GCAGTGACTCTGACAACCCTCAGACTCCAAAAACGCCTACAACTCCCCTTCCACAAACCCCTACCAGGCG
CACAGAGCTGTATGCCGTGATAGACATCGAGAGAACTGCTGCTATGTCAAATTTGCAGAAAGCACTGCCA
CGAGATGATGGTACATCTAGGAAAACTAGACACAATAGTACTGATCTGCCCATGTGA

Translation (508 aa):
MGSCCSCPDKDTVPDNHRNKFKVINVDDDGNELGSGIMELTDTELILYTRKRDSVKWHYLCLRRYGYDSN
LFSFESGRRCQTGQGIFAFKCARAEELFNMLQEIMQNNSINVVEEPVVERNNHQTELEVPRTPRTPTTPG
FAAQNLPNGYPRYPSFGDASSHPSSRHPSVGSARLPSVGEESTHPLLVAEEQVHTYVNTTGVQEERKNRT
SVHVPLEARVSNAESSTPKEEPSSIEDRDPQILLEPEGVKFVLGPTPVQKQLMEKEKLEQLGRDQVSGSG
ANNTEWDTGYDSDERRDAPSVNKLVYENINGLSIPSASGVRRGRLTSTSTSDTQNINNSAQRRTALLNYE
NLPSLPPVWEARKLSRDEDDNLGPKTPSLNGYHNNLDPMHNYVNTENVTVPASAHKIEYSRRRDCTPTVF
NFDIRRPSLEHRQLNYIQVDLEGGSDSDNPQTPKTPTTPLPQTPTRRTELYAVIDIERTAAMSNLQKALP
RDDGTSRKTRHNSTDLPM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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