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Report for CCDS94472.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94472.1 Public Homo sapiens 9 B3GALT9 24 110 108 CCDS HistoryNCBI Gene:100288842Re-query CCDS DB by CCDS ID:94472.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94472.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000464488.3 ENSP00000491256.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000464488.3Link to Ensembl Protein Viewer:ENSP00000491256.1Re-query CCDS DB by Nucleotide ID:ENST00000464488Re-query CCDS DB by Protein ID:ENSP00000491256
Original member Current member EBI ENST00000689072.1 ENSP00000508889.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000689072.1Link to Ensembl Protein Viewer:ENSP00000508889.1Re-query CCDS DB by Nucleotide ID:ENST00000689072Re-query CCDS DB by Protein ID:ENSP00000508889
Original member Current member NCBI NM_001386823.1 NP_001373752.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001386823.1Link to Protein Sequence:NP_001373752.1Re-query CCDS DB by Nucleotide ID:NM_001386823Re-query CCDS DB by Protein ID:NP_001373752Link to BLAST:NP_001373752.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001373752.1 369 A8MXE2 369 100% 0 0

Chromosomal Locations for CCDS 94472.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 120796604 120796609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120798575 120799678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGCAAGTGACTTTCTGCAGACTTCGGACTCACCAGTGGTGTTTCATTCTATTTAATGTCATCCTATTTC
ATGCCTTGCTTTTTGGGACTGACTTTGTGGAGGAATACTTTCTGCATTCTTTGCCTTATATAGATGTGAA
AGTTCTTGAAATTAAGAATAAGGCAAGAAAATTGAACATCGAACCCCTAAGAAGTAATCTCTCCAAATAT
TATGTCCTGAGCCAGTCAGAAATATGTAAAGGGAAGAACATTTTTTTGCTGTCTCTTATCTTCAGTAGCC
CAGGAAATGGAACAAGACGGGACCTCATTAGGAAAACTTGGGGCAATGTGACCAGTGTCCAAGGGCATCC
CATTCTCACACTGTTTGCTCTGGGAATGCCTGTTTCGGTAACTACCCAGAAAGAGATCAACAAAGAATCC
TGTAAGAATAATGATATAATTGAAGGAATCTTCTTGGACAGTTCTGAGAACCAAACCCTGAAGATCATTG
CAATGATACAGTGGGCTGTGGCTTTCTGCCCTAATGCCCTGTTCATTCTCAAGGTGGATGAAGAGACGTT
TGTCAATCTACCAAGCTTGGTAGACTATCTTCTCAATCTGAAAGAACACCTAGAAGATATCTATGTAGGA
AGAGTTCTTCATCAGGTTACACCCAATAGAGATCCTCAGAACAGAGACTTTGTCCCTCTTAGTGAGTACC
CAGAAAAATACTACCCAGATTACTGCAGTGGTGAGGCCTTTATAATGTCCCAAGATGTGGCTCGAATGAT
GTATGTGGTTTTCAAAGAAGTACCCATGATGGTGCCAGCTGATGTGTTTGTAGGAATTTGTGCTAAGTTC
ATTGGCCTTATACCCATCCACAGCTCAAGGTTTTCTGGGAAAAGGCACATTAGATACAACAGATGTTGCT
ATAAGTTCATTTTTACATCCTCAGAAATTGCAGATCCTGAAATGCCCCTAGCATGGAAGGAAATTAATGA
TGGAAAAGAATGTACACTGTTTGAGACATCCTATGAGCTCATTTCCTGCAAACTTCTGACGTACCTTGAC
AGCTTTAAACGTTTTCACATGGGGACCATAAAAAACAATCTCATGTATTTTGCTGATTAG

Translation (369 aa):
MQVTFCRLRTHQWCFILFNVILFHALLFGTDFVEEYFLHSLPYIDVKVLEIKNKARKLNIEPLRSNLSKY
YVLSQSEICKGKNIFLLSLIFSSPGNGTRRDLIRKTWGNVTSVQGHPILTLFALGMPVSVTTQKEINKES
CKNNDIIEGIFLDSSENQTLKIIAMIQWAVAFCPNALFILKVDEETFVNLPSLVDYLLNLKEHLEDIYVG
RVLHQVTPNRDPQNRDFVPLSEYPEKYYPDYCSGEAFIMSQDVARMMYVVFKEVPMMVPADVFVGICAKF
IGLIPIHSSRFSGKRHIRYNRCCYKFIFTSSEIADPEMPLAWKEINDGKECTLFETSYELISCKLLTYLD
SFKRFHMGTIKNNLMYFAD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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