NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS94661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94661.1 Public Homo sapiens X SEPTIN6 24 110 108 CCDS HistoryNCBI Gene:23157Re-query CCDS DB by CCDS ID:94661.1Re-query CCDS DB by GeneID:23157See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94661.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354416.7 ENSP00000346397.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354416.7Link to Ensembl Protein Viewer:ENSP00000346397.3Re-query CCDS DB by Nucleotide ID:ENST00000354416Re-query CCDS DB by Protein ID:ENSP00000346397
Current member NCBI NM_001410710.1 NP_001397639.1 Accepted alive Link to Nucleotide Sequence:NM_001410710.1Link to Protein Sequence:NP_001397639.1Re-query CCDS DB by Nucleotide ID:NM_001410710Re-query CCDS DB by Protein ID:NP_001397639Link to BLAST:NP_001397639.1

Chromosomal Locations for CCDS 94661.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 119620036 119620051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119629318 119629508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119633360 119633492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119637027 119637195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119640692 119640788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119649937 119650098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119652854 119653040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119663482 119663677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119675554 119675668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119693076 119693105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1296 nt):
ATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTGGCTGGACATGTGG
GGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAACATCCTGTG
CGTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAGGGGAG
CCAGCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTGA
GGCTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCC
TATCGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTA
CACACCTACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGT
CTCTGGACCTAGTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGA
TGCCATTTCGAAGAGTGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTC
CAGATCTATCAGTTTCCTACAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGC
CGTTTGCTGTCATTGGCAGCACAGAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCC
TTGGGGCACTGTGCAGGTTGAAAACGAGGCCCACTGCGACTTTGTGAAGCTGCGGGAGATGCTGATTCGG
GTCAACATGGAGGATCTGCGGGAGCAGACCCACACCCGGCACTATGAGCTGTATCGCCGCTGTAAGCTGG
AGGAGATGGGCTTCAAGGACACCGACCCTGACAGCAAACCCTTCAGTTTACAGGAGACATATGAGGCCAA
AAGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGAGGAGATGAGACAGATGTTCGTCCAGCGAGTC
AAAGAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGCACGAGAAGTTTGACCGTCTGAAGAAAC
TGCACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTGGATGATGAAGTGAATGCTTTCAA
GCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGGAGGCTCACAGACTCTGAAG
AGAGACAAAGAGAAGAAAAATTTGGGCTTCCTGTAG

Translation (431 aa):
MAATDIARQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKFEGE
PATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFEAYLQEELKIRRVL
HTYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGV
QIYQFPTDDESVAEINGTMNAHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVENEAHCDFVKLREMLIR
VNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQKKEEEMRQMFVQRV
KEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQGSQAGGSQTLK
RDKEKKNLGFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH