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Report for CCDS94043.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94043.1 Public Homo sapiens 7 SUN1 24 110 108 CCDS HistoryNCBI Gene:23353Re-query CCDS DB by CCDS ID:94043.1Re-query CCDS DB by GeneID:23353See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94043.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000405266.5 ENSP00000384116.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405266.5Link to Ensembl Protein Viewer:ENSP00000384116.1Re-query CCDS DB by Nucleotide ID:ENST00000405266Re-query CCDS DB by Protein ID:ENSP00000384116
Original member Current member NCBI NM_001367664.1 NP_001354593.1 Accepted alive Link to Nucleotide Sequence:NM_001367664.1Link to Protein Sequence:NP_001354593.1Re-query CCDS DB by Nucleotide ID:NM_001367664Re-query CCDS DB by Protein ID:NP_001354593Link to BLAST:NP_001354593.1

Chromosomal Locations for CCDS 94043.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 832525 832601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 838798 838986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 841946 842130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 843206 843232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 843341 843520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 849923 850033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 851384 851482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 851950 852043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 852609 852667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 852810 852952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 853409 853618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 854920 855006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 856358 856401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 857828 857957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 860128 860382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 861380 861464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 865952 866067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 869349 869516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 872470 872562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 873215 873331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2469 nt):
ATGGATTTTTCTCGGCTTCACATGTACAGTCCTCCCCAGTGTGTGCCGGAGAACACGGGCTACACGTATG
CGCTCAGTTCCAGCTATTCTTCAGATGCTCTGGATTTTGAGACGGAGCACAAATTGGACCCTGTATTTGA
TTCTCCACGGATGTCCCGCCGTAGTTTGCGCCTGGCCACGACAGCATGCACCCTGGGGGATGGTGAGGCT
GTGGGTGCCGACAGCGGCACCAGCAGCGCTGTCTCCCTGAAGAACCGAGCGGCCAGAACAACAAAACAGC
GCAGAAGCACAAACAAATCAGCTTTTAGTATCAACCACGTGTCAAGGCAGGTCACGTCCTCTGGCGTCAG
CCACGGCGGCACTGTCAGCCTGCAGGATGCTGTGACTCGACGGCCTCCTGTATTGGACGAGTCTTGGATT
CGTGAACAGACCACAGTGGACCACTTCTGGGGTCTTGATGATGATGGTGATCTTAAAGGTGGAAATAAAG
CTGCCATTCAGGGAAACGGGGATGTGGGAGCCGCCGCCGCCACCGCGCACAACGGCTTCTCCTGCAGCAA
CTGCAGCATGCTGTCCGAGCGCAAGGACGTGCTCACGGCGCACCCCGCGGCCCCCGGGCCCGTGTCGAGA
GTTTATTCTAGGGACAGGAATCAAAAATGCGACGACTGTAAGGGCAAGAGGCACCTCGACGCGCACACAG
CCGCCCACTCGCAGTCGCCACGGCTGCCCGGTCGGGCAGGGACCCTCTGGCACATCTGGGCATGTGCAGG
TTACTTCTTGCTGCAGATTCTGCGCAGGATCGGAGCTGTGGGCCAGGCTGTGTCCAGGACGGCGTGGTCG
GCCCTTTGGCTGGCCGTGGTTGCTCCAGGGAAGGCAGCCTCTGGAGTGTTCTGGTGGCTGGGGATTGGAT
GGTACCAGTTTGTTACTTTGATTTCTTGGCTGAATGTGTTTCTTCTTACCAGGTGCCTTCGAAACATCTG
CAAGTTTTTAGTCTTGCTCATCCCACTCTTCCTTTTACTAGCAGGTCTCTCCTTACGGGGCCAGGGCAAT
TTCTTTTCGTTCTTGCCCGTGTTGAACTGGGCAAGCATGCATAGAACACAGCGGGTGGATGACCCCCAGG
ACGTGTTTAAACCCACGACTTCTCGCCTGAAGCAGCCTCTGCAGGGTGACAGTGAGGCTTTTCCGTGGCA
TTGGATGAGTGGCGTGGAGCAGCAGGTGGCCTCTCTGTCTGGACAGTGCCACCACCATGGTGAGAATCTC
CGAGAGCTGACCACTTTGCTACAGAAGCTGCAGGCTCGGGTGGACCAGATGGAAGGCGGCGCTGCCGGGC
CGTCAGCTTCGGTCAGAGACGCTGTGGGACAGCCCCCGAGGGAGACTGACTTTATGGCCTTTCACCAAGA
ACATGAAGTGCGTATGTCACACTTGGAAGATATTCTGGGAAAACTGAGAGAAAAATCTGAGGCCATCCAG
AAGGAACTAGAACAGACCAAGCAAAAAACAATCAGTGCGGTTGGTGAGCAGCTCCTGCCCACAGTCGAGC
ACCTCCAGCTGGAGCTGGATCAGCTAAAGTCAGAGCTGTCCAGCTGGCGACACGTGAAGACCGGCTGTGA
GACAGTGGATGCCGTACAAGAAAGAGTGGACGTGCAAGTCAGAGAAATGGTGAAACTCCTGTTTTCCGAA
GATCAGCAAGGCGGTTCTCTGGAACAGCTGCTGCAGAGGTTCTCATCACAGTTTGTGAGCAAAGGCGACT
TGCAGACGATGCTGCGAGACCTGCAGCTGCAGATCCTGCGGAACGTCACCCACCACGTTTCCGTGACCAA
GCAGCTCCCAACCTCAGAAGCCGTGGTGTCTGCTGTGAGCGAGGCGGGGGCGTCTGGAATAACAGAGGCG
CAAGCACGTGCCATCGTGAACAGCGCCTTGAAGCTGTATTCCCAAGATAAGACCGGGATGGTGGACTTTG
CTCTGGAATCTGGTGGTGGCAGCATCTTGAGTACTCGCTGTTCTGAAACTTACGAAACCAAAACGGCGCT
GATGAGTCTGTTTGGGATCCCGCTGTGGTACTTCTCGCAGTCCCCGCGCGTGGTCATCCAGCCTGACATT
TACCCCGGTAACTGCTGGGCATTTAAAGGCTCCCAGGGGTACCTGGTGGTGAGGCTCTCCATGATGATCC
ACCCAGCCGCCTTCACTCTGGAGCACATCCCTAAGACGCTGTCGCCAACAGGCAACATCAGCAGCGCCCC
CAAGGACTTCGCCGTCTATGGATTAGAAAATGAGTATCAGGAAGAAGGGCAGCTTCTGGGACAGTTCACG
TATGATCAGGATGGGGAGTCGCTCCAGATGTTCCAGGCCCTGAAAAGACCCGACGACACAGCTTTCCAAA
TAGTGGAACTTCGGATTTTTTCTAACTGGGGCCATCCTGAGTATACCTGTCTGTATCGGTTCAGAGTTCA
TGGCGAACCTGTCAAGTGA

Translation (822 aa):
MDFSRLHMYSPPQCVPENTGYTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLATTACTLGDGEA
VGADSGTSSAVSLKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSHGGTVSLQDAVTRRPPVLDESWI
REQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGAAAATAHNGFSCSNCSMLSERKDVLTAHPAAPGPVSR
VYSRDRNQKCDDCKGKRHLDAHTAAHSQSPRLPGRAGTLWHIWACAGYFLLQILRRIGAVGQAVSRTAWS
ALWLAVVAPGKAASGVFWWLGIGWYQFVTLISWLNVFLLTRCLRNICKFLVLLIPLFLLLAGLSLRGQGN
FFSFLPVLNWASMHRTQRVDDPQDVFKPTTSRLKQPLQGDSEAFPWHWMSGVEQQVASLSGQCHHHGENL
RELTTLLQKLQARVDQMEGGAAGPSASVRDAVGQPPRETDFMAFHQEHEVRMSHLEDILGKLREKSEAIQ
KELEQTKQKTISAVGEQLLPTVEHLQLELDQLKSELSSWRHVKTGCETVDAVQERVDVQVREMVKLLFSE
DQQGGSLEQLLQRFSSQFVSKGDLQTMLRDLQLQILRNVTHHVSVTKQLPTSEAVVSAVSEAGASGITEA
QARAIVNSALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQSPRVVIQPDI
YPGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLGQFT
YDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRFRVHGEPVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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