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Report for CCDS93667.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93667.1 Public Homo sapiens 4 PALLD 24 110 108 CCDS HistoryNCBI Gene:23022Re-query CCDS DB by CCDS ID:93667.1Re-query CCDS DB by GeneID:23022See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93667.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000704822.1 ENSP00000516055.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704822.1Link to Ensembl Protein Viewer:ENSP00000516055.1Re-query CCDS DB by Nucleotide ID:ENST00000704822Re-query CCDS DB by Protein ID:ENSP00000516055
Original member Current member NCBI NM_001367568.1 NP_001354497.1 Accepted alive Link to Nucleotide Sequence:NM_001367568.1Link to Protein Sequence:NP_001354497.1Re-query CCDS DB by Nucleotide ID:NM_001367568Re-query CCDS DB by Protein ID:NP_001354497Link to BLAST:NP_001354497.1

Chromosomal Locations for CCDS 93667.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 168894600 168894677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 168896549 168896599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 168898493 168898714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 168903757 168903906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 168913927 168914021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 168915895 168916027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 168921534 168921741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 168924255 168924420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 168924945 168925078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 168926213 168926385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1410 nt):
ATGGCTCGTCGACTGCTAGGTGCTGACAGTGCAACTGTCTTTAATATTCAGGAGCCAGAAGAGGAAACAG
CTAATCAGGACATTGGTTCTCCTCATGCTTCTGTAGGGAGTCCTCTGGATGGTCAAAAGGAATACAAAGT
CTCCAGCTGTGAACAGAGACTCATCAGTGAAATAGAGTACAGGCTAGAAAGGTCTCCTGTGGATGAATCA
GGTGATGAAGTTCAGTATGGAGATGTGCCTGTGGAAAATGGAATGGCACCATTCTTTGAGATGAAGCTGA
AACATTACAAGATCTTTGAGGGAATGCCAGTAACTTTCACATGTAGAGTGGCTGGAAATCCAAAGCCAAA
GATCTATTGGTTTAAAGATGGGAAGCAGATCTCTCCAAAGAGTGATCACTACACCATTCAAAGAGATCTC
GATGGGACCTGCTCCCTCCATACCACAGCCTCCACCCTAGATGATGATGGGAATTATACAATTATGGCTG
CAAACCCTCAGGGCCGCATCAGTTGTACTGGACGGCTAATGGTACAGGCTGTCAACCAAAGAGGTCGAAG
TCCCCGGTCTCCCTCAGGCCATCCTCATGTCAGAAGGCCTCGTTCTAGATCAAGGGACAGTGGAGACGAA
AATGAACCAATTCAGGAGCGATTCTTCAGACCTCACTTCTTGCAGGCTCCTGGAGATCTGACTGTTCAAG
AAGGAAAACTCTGCAGAATGGACTGCAAAGTCAGTGGGTTACCAACCCCAGATCTAAGCTGGCAACTAGA
TGGAAAGCCCGTACGCCCTGACAGTGCTCACAAGATGCTGGTGCGTGAGAACGGGGTGCACTCTCTGATC
ATAGAGCCAGTCACGTCACGTGATGCCGGCATCTACACATGTATAGCTACCAACCGAGCAGGACAGAACT
CATTCAGCCTGGAGCTTGTGGTTGCTGCTAAAGAAGCACACAAACCCCCTGTGTTTATTGAGAAGCTCCA
AAACACAGGAGTTGCTGATGGGTACCCAGTGCGGCTGGAATGTCGTGTATTGGGAGTGCCACCACCTCAG
ATATTTTGGAAGAAAGAAAATGAATCACTCACTCACAGCACTGACCGAGTGAGCATGCACCAGGACAACC
ACGGCTACATCTGCCTGCTCATTCAGGGAGCCACAAAAGAAGATGCTGGGTGGTATACTGTGTCAGCCAA
GAATGAAGCAGGGATTGTGTCCTGTACTGCCAGGCTGGACGTTTACACCCAGTGGCATCAGCAGTCACAG
AGCACCAAGCCAAAAAAAGTACGGCCCTCAGCCAGTCGCTATGCAGCACTTTCGGACCAGGGACTAGACA
TCAAAGCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTGGTAGAAAGTGA
GGACCTGTAA

Translation (469 aa):
MARRLLGADSATVFNIQEPEEETANQDIGSPHASVGSPLDGQKEYKVSSCEQRLISEIEYRLERSPVDES
GDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDL
DGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNQRGRSPRSPSGHPHVRRPRSRSRDSGDE
NEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLI
IEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKEAHKPPVFIEKLQNTGVADGYPVRLECRVLGVPPPQ
IFWKKENESLTHSTDRVSMHQDNHGYICLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVYTQWHQQSQ
STKPKKVRPSASRYAALSDQGLDIKAAFQPEANPSHLTLNTALVESEDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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