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Report for CCDS92181.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92181.1 Public Homo sapiens 16 ESRP2 24 110 108 CCDS HistoryNCBI Gene:80004Re-query CCDS DB by CCDS ID:92181.1Re-query CCDS DB by GeneID:80004See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92181.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000565858.5 ENSP00000454554.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565858.5Link to Ensembl Protein Viewer:ENSP00000454554.1Re-query CCDS DB by Nucleotide ID:ENST00000565858Re-query CCDS DB by Protein ID:ENSP00000454554
Original member Current member NCBI NM_001365264.1 NP_001352193.1 Accepted alive Link to Nucleotide Sequence:NM_001365264.1Link to Protein Sequence:NP_001352193.1Re-query CCDS DB by Nucleotide ID:NM_001365264Re-query CCDS DB by Protein ID:NP_001352193Link to BLAST:NP_001352193.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352193.1 727 Q9H6T0-1 727 100% 0 0

Chromosomal Locations for CCDS 92181.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 68230226 68230315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68230389 68230554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68230841 68231027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68231178 68231376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68231482 68231694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68231802 68232103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68232246 68232288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68232371 68232503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68232577 68232717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68232761 68232815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68233327 68233425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68233768 68233882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68233994 68234107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68235634 68235762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68235848 68236045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2184 nt):
ATGACTCCGCCGCCGCCGCCGCCCCCTCCCCCGGGCCCTGACCCCGCGGCCGACCCCGCCGCGGACCCCT
GCCCCTGGCCCGGATCACTGGTCGTCCTCTTCGGGGCTACGGCGGGTGCGCTGGGACGGGACCTGGGCTC
GGACGAGACCGACTTAATCCTCCTAGTTTGGCAAGTGGTTGAGCCGCGGAGCCGCCAGGTGGGGACGCTG
CACAAATCGCTGGTTCGTGCCGAGGCGGCCGCACTGAGTACGCAGTGCCGCGAGGCGAGCGGCCTGAGCG
CCGACAGCCTGGCGCGGGCAGAGCCGCTGGACAAGGTGCTGCAGCAGTTCTCACAGCTGGTGAACGGGGA
TGTGGCTTTGCTGGGCGGGGGCCCCTACATGCTCTGCACTGATGGGCAGCAGCTATTGCGACAGGTCCTG
CACCCCGAGGCCTCCAGGAAGAACCTGGTGCTCCCCGACATGTTCTTCTCCTTCTATGACCTCCGAAGAG
AATTCCATATGCAGCATCCAAGCACCTGCCCTGCCAGGGACCTCACTGTGGCCACCATGGCACAGGGTTT
AGGACTGGAGACAGATGCCACAGAGGATGACTTTGGGGTCTGGGAAGTCAAGACAATGGTAGCTGTTATC
CTCCATCTACTCAAAGAGCCCAGCAGTCAATTGTTTTCGAAGCCCGAGGTGATAAAGCAGAAATACGAGA
CGGGGCCTTGCTCTGACAGCACTGTGCCCTGCCCCTACAGCAGCAAGGCTGATGTGGTGGACAGTGAGAC
TGTGGTACGGGCTCGTGGGTTGCCGTGGCAGTCATCAGACCAGGACGTGGCTCGCTTCTTCAAAGGGCTC
AACGTGGCCAGGGGTGGTGTAGCACTCTGCCTCAACGCCCAGGGCCGCAGAAATGGCGAGGCCCTCATCC
GCTTTGTGGACAGCGAGCAGCGGGACCTAGCGCTGCAGAGACACAAGCACCACATGGGCGTCCGCTATAT
TGAGGTGTATAAAGCGACAGGGGAGGAGTTTGTAAAGATTGCAGGGGGCACATCACTAGAGGTGGCTCGT
TTCTTGTCACGGGAAGACCAAGTGATCCTGCGGCTGCGGGGACTGCCCTTCTCGGCTGGGCCAACGGACG
TGCTTGGCTTCCTGGGGCCAGAGTGCCCAGTGACTGGGGGTACCGAGGGGCTGCTCTTTGTGCGCCATCC
TGATGGCCGGCCGACTGGTGATGCCTTCGCCCTCTTTGCTTGTGAGGAGCTGGCACAGGCTGCACTGCGC
AGGCACAAGGGCATGCTGGGTAAGCGATACATTGAACTCTTCCGGAGCACTGCAGCCGAAGTGCAGCAGG
TCTTGAACCGCTATGCATCCGGCCCACTCCTTCCTACACTGACTGCCCCACTGCTGCCCATCCCCTTCCC
ACTGGCACCTGGGACTGGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGGCCACCATTGAAGAC
ATCCTGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGGTGCTCAACCAGC
AGGGCCGGCCATCGGGCGATGCCTTCATTCAGATGACATCAGCAGAGCGAGCCCTAGCTGCTGCTCAGCG
TTGCCATAAGAAGGTGATGAAGGAGCGCTACGTGGAGGTGGTCCCCTGTTCCACAGAGGAGATGAGCCGA
GTGCTGATGGGGGGCACCTTGGGCCGCAGTGGCATGTCCCCTCCACCCTGCAAGCTGCCCTGCCTCTCAC
CACCTACCTACACCACCTTCCAAGCCACCCCAACGCTCATTCCCACGGAGACGGCAGCTCTATACCCCTC
TTCAGCACTGCTCCCAGCTGCCAGGGTGCCTGCTGCCCCCACCCCTGTTGCCTACTATCCAGGGCCAGCC
ACTCAACTCTACCTGAACTACACAGCCTACTACCCAAGCCCCCCAGTCTCCCCCACCACTGTGGGCTACC
TCACTACACCCACTGCTGCCCTGGCCTCTGCTCCCACCTCAGTGTTGTCCCAGTCAGGAGCCTTGGTCCG
CATGCAGGGTGTCCCATACACGGCTGGTATGAAGGATCTGCTCAGCGTCTTCCAGGCCTACCAGCTACCC
GCTGATGACTACACCAGTCTGATGCCTGTTGGTGACCCACCTCGCACTGTGTTACAAGCCCCCAAGGAAT
GGGTGTGTTTGTAG

Translation (727 aa):
MTPPPPPPPPPGPDPAADPAADPCPWPGSLVVLFGATAGALGRDLGSDETDLILLVWQVVEPRSRQVGTL
HKSLVRAEAAALSTQCREASGLSADSLARAEPLDKVLQQFSQLVNGDVALLGGGPYMLCTDGQQLLRQVL
HPEASRKNLVLPDMFFSFYDLRREFHMQHPSTCPARDLTVATMAQGLGLETDATEDDFGVWEVKTMVAVI
LHLLKEPSSQLFSKPEVIKQKYETGPCSDSTVPCPYSSKADVVDSETVVRARGLPWQSSDQDVARFFKGL
NVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKIAGGTSLEVAR
FLSREDQVILRLRGLPFSAGPTDVLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELAQAALR
RHKGMLGKRYIELFRSTAAEVQQVLNRYASGPLLPTLTAPLLPIPFPLAPGTGRDCVRLRGLPYTATIED
ILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVEVVPCSTEEMSR
VLMGGTLGRSGMSPPPCKLPCLSPPTYTTFQATPTLIPTETAALYPSSALLPAARVPAAPTPVAYYPGPA
TQLYLNYTAYYPSPPVSPTTVGYLTTPTAALASAPTSVLSQSGALVRMQGVPYTAGMKDLLSVFQAYQLP
ADDYTSLMPVGDPPRTVLQAPKEWVCL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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