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Report for CCDS91583.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91583.1 Public Homo sapiens 11 ZC3H12C 24 110 108 CCDS HistoryNCBI Gene:85463Re-query CCDS DB by CCDS ID:91583.1Re-query CCDS DB by GeneID:85463See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91583.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000528673.5 ENSP00000431821.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528673.5Link to Ensembl Protein Viewer:ENSP00000431821.1Re-query CCDS DB by Nucleotide ID:ENST00000528673Re-query CCDS DB by Protein ID:ENSP00000431821
Current member NCBI NM_001411037.1 NP_001397966.1 Accepted alive Link to Nucleotide Sequence:NM_001411037.1Link to Protein Sequence:NP_001397966.1Re-query CCDS DB by Nucleotide ID:NM_001411037Re-query CCDS DB by Protein ID:NP_001397966Link to BLAST:NP_001397966.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001397966.1 884 Q9C0D7-2 884 100% 0 0

Chromosomal Locations for CCDS 91583.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 110131083 110131106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110136663 110137414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110152919 110153058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110159256 110159490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110163273 110163379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 110164341 110165737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2655 nt):
ATGTCTTTGTATTTTCCTGCTAACGAATACGGGGTGCTTTGCATTCAGGAATACAGAAAAAACAGCAAAG
TGGAGTCAAGTACACGTAACAACTTCATGGGCTTGAAGGATCACCTAGGGCATGACCTCGGCCACCTTTA
TGTGGAGAGCACTGACCCACAGTTAAGTCCAGCTGTACCTTGGTCAACAGTAGAAAACCCAAGTATGGAT
ACCGTTAATGTGGGGAAGGATGAAAAAGAGGCGTCTGAAGAGAATGCAAGCTCTGGTGACTCTGAAGAAA
ACACAAATTCTGATCATGAGTCAGAACAATTGGGTAGCATTTCAGTAGAGCCAGGCTTGATAACTAAGAC
TCACAGACAGCTCTGCAGGTCTCCCTGTTTAGAGCCTCACATACTCAAGCGCAATGAAATTTTGCAAGAC
TTTAAACCTGAAGAGTCCCAGACTACATCCAAGGAAGCAAAGAAACCACCTGATGTGGTGCGAGAATACC
AAACAAAACTGGAGTTTGCACTTAAGTTAGGTTATTCTGAAGAACAGGTTCAGCTTGTACTAAACAAACT
TGGTACTGATGCTTTAATCAATGATATTTTGGGAGAACTTGTCAAACTTGGAAATAAAAGTGAGGCTGAT
CAAACGGTTAGTACAATTAACACTATAACACGGGAAACTTCTTCCCTGGAATCTCAGAGGTCTGAATCTC
CAATGCAAGAGATTGTAACAGATGATGGTGAAAATCTGAGACCAATAGTTATTGATGGCAGCAATGTGGC
AATGAGCCATGGAAACAAAGAAGTATTTTCCTGCAGAGGAATAAAATTGGCAGTGGATTGGTTTTTGGAA
AGAGGCCACAAAGACATTACAGTTTTTGTTCCTGCTTGGAGGAAAGAGCAATCCCGACCTGATGCTCTCA
TTACAGATCAGGAAATTTTACGTAAATTAGAGAAGGAGAAAATCCTGGTGTTCACGCCATCCCGGCGAGT
CCAGGGGAGGAGAGTGGTGTGCTATGACGACAGGTTCATCGTGAAGCTGGCTTTTGAGTCGGACGGTATC
ATTGTGTCCAATGATAACTACAGGGACTTGGCTAATGAGAAGCCAGAATGGAAGAAGTTCATAGATGAAC
GATTATTAATGTATTCATTTGTCAATGACAAGTTCATGCCCCCTGATGACCCTCTTGGCAGACATGGCCC
CAGTCTGGATAATTTTCTGAGGAAGAAACCTATTGTTCCTGAACACAAAAAGCAGCCTTGTCCATATGGA
AAGAAGTGTACCTATGGACACAAGTGCAAATATTACCATCCCGAAAGGGGCAGTCAGCCACAGCGGTCAG
TGGCTGATGAACTCCGTGCCATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGGAGGACTGGTGAA
AAGCAACAGTGTTCCTTGTAGCACCAAGGCTGATAGCACTTCTGATGTCAAACGAGGTGCTCCAAAGAGG
CAATCAGATCCAAGCATAAGGACACAAGTCTACCAAGACCTAGAAGAAAAGCTTCCCACCAAAAACAAAT
TGGAAACCAGGTCTGTACCTTCCTTAGTTAGCATCCCAGCTACTTCTACTGCAAAACCCCAAAGCACTAC
ATCTTTAAGCAATGGCCTTCCATCTGGAGTTCATTTCCCACCTCAGGATCAAAGACCACAGGGACAATAT
CCTTCAATGATGATGGCAACCAAAAATCATGGAACGCCAATGCCTTATGAACAGTATCCAAAATGTGACT
CACCTGTCGACATCGGATATTATTCCATGTTGAATGCATACTCAAATCTGAGTCTCTCAGGCCCACGAAG
CCCTGAAAGGCGTTTCTCCTTAGACACAGATTATAGAATAAGTTCCGTAGCTTCTGACTGCAGCAGTGAA
GGGAGCATGAGCTGTGGGAGCAGTGACTCCTACGTGGGTTACAATGACCGGTCCTATGTCAGCTCCCCCG
ACCCACAGCTAGAGGAGAATTTGAAGTGTCAACACATGCACCCTCACAGCCGCCTTAATCCTCAACCGTT
CCTGCAGAATTTCCACGACCCCTTAACCAGAGGGCAAAGTTACAGTCACGAAGAACCAAAGTTCCATCAC
AAGCCTCCTCTTCCGCACCTGGCTCTGCACCTGCCGCACTCCGCTGTGGGCGCCCGGTCCAGCTGTCCTG
GCGACTACCCCTCTCCTCCAAGTTCAGCACACTCTAAGGCACCACACCTAGGGAGGTCCTTGGTGGCCAC
GAGAATAGACAGCATCTCTGACTCTCGACTTTATGACAGTTCTCCTTCACGACAAAGAAAGCCTTATTCC
CGCCAGGAAGGCCTGGGAAGCTGGGAGAGGCCAGGCTATGGGATCGACGCCTATGGGTACCGGCAGACTT
ATTCCTTGCCCGATAACTCCACACAGCCGTGTTATGAGCAGTTCACCTTCCAGAGCCTCCCTGAGCAACA
GGAGCCAGCCTGGCGGATCCCATACTGTGGAATGCCGCAAGATCCCCCGAGGTATCAAGACAACCGAGAA
AAGATTTATATCAATTTGTGCAACATCTTCCCCCCTGACCTTGTGAGAATTGTCATGAAAAGGAATCCTC
ACATGACAGACGCCCAGCAGCTCGCCGCAGCCATTTTAGTGGAGAAATCCCAGCTGGGTTATTGA

Translation (884 aa):
MSLYFPANEYGVLCIQEYRKNSKVESSTRNNFMGLKDHLGHDLGHLYVESTDPQLSPAVPWSTVENPSMD
TVNVGKDEKEASEENASSGDSEENTNSDHESEQLGSISVEPGLITKTHRQLCRSPCLEPHILKRNEILQD
FKPEESQTTSKEAKKPPDVVREYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKSEAD
QTVSTINTITRETSSLESQRSESPMQEIVTDDGENLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLE
RGHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGI
IVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYG
KKCTYGHKCKYYHPERGSQPQRSVADELRAMSRNTAAKTANEGGLVKSNSVPCSTKADSTSDVKRGAPKR
QSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPATSTAKPQSTTSLSNGLPSGVHFPPQDQRPQGQY
PSMMMATKNHGTPMPYEQYPKCDSPVDIGYYSMLNAYSNLSLSGPRSPERRFSLDTDYRISSVASDCSSE
GSMSCGSSDSYVGYNDRSYVSSPDPQLEENLKCQHMHPHSRLNPQPFLQNFHDPLTRGQSYSHEEPKFHH
KPPLPHLALHLPHSAVGARSSCPGDYPSPPSSAHSKAPHLGRSLVATRIDSISDSRLYDSSPSRQRKPYS
RQEGLGSWERPGYGIDAYGYRQTYSLPDNSTQPCYEQFTFQSLPEQQEPAWRIPYCGMPQDPPRYQDNRE
KIYINLCNIFPPDLVRIVMKRNPHMTDAQQLAAAILVEKSQLGY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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