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Report for CCDS8787.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8787.1 Public Homo sapiens 12 MCRS1 24 110 108 CCDS HistoryNCBI Gene:10445Re-query CCDS DB by CCDS ID:8787.1Re-query CCDS DB by GeneID:10445See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8787.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343810.9 ENSP00000345358.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343810.9Link to Ensembl Protein Viewer:ENSP00000345358.4Re-query CCDS DB by Nucleotide ID:ENST00000343810Re-query CCDS DB by Protein ID:ENSP00000345358
Original member Current member EBI ENST00000550165.5 ENSP00000448056.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000550165.5Link to Ensembl Protein Viewer:ENSP00000448056.1Re-query CCDS DB by Nucleotide ID:ENST00000550165Re-query CCDS DB by Protein ID:ENSP00000448056
Original member Current member NCBI NM_006337.5 NP_006328.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006337.5Link to Protein Sequence:NP_006328.2Re-query CCDS DB by Nucleotide ID:NM_006337Re-query CCDS DB by Protein ID:NP_006328Link to BLAST:NP_006328.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006328.2 462 Q96EZ8-1 462 100% 0 0

Chromosomal Locations for CCDS 8787.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 49558643 49558729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49558843 49558970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49559214 49559301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49559453 49559535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49559729 49559821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49559939 49559967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49560295 49560370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49563001 49563139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49563438 49563546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49564481 49564590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49564737 49564895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49565529 49565667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49566077 49566215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49566722 49566731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1389 nt):
ATGGACAAAGATTCTCAGGGGCTGCTAGATTCATCCCTGATGGCATCAGGCACTGCCAGCCGCTCAGAGG
ATGAGGAGTCACTGGCAGGGCAGAAGCGAGCCTCCTCCCAGGCCTTGGGCACCATCCCTAAACGGAGAAG
CTCCTCCAGGTTCATCAAGAGGAAGAAGTTCGATGATGAGCTGGTGGAGAGCAGCCTGGCAAAATCTTCT
ACCCGGGCAAAGGGGGCCAGTGGGGTGGAACCAGGGCGCTGTTCGGGGAGTGAACCCTCCTCCAGTGAGA
AGAAGAAGGTATCCAAAGCCCCCAGCACTCCTGTGCCACCCAGCCCAGCCCCAGCCCCTGGACTCACCAA
GCGTGTGAAGAAGAGTAAACAGCCACTTCAGGTGACCAAGGATCTGGGCCGCTGGAAGCCTGCAGATGAC
CTCCTGCTCATAAATGCTGTGTTGCAGACCAACGACCTGACCTCCGTCCACCTGGGCGTGAAATTCAGCT
GCCGCTTCACCCTTCGGGAGGTCCAGGAGCGTTGGTACGCCCTGCTCTACGATCCTGTCATCTCCAAGTT
GGCCTGTCAGGCCATGAGGCAGCTGCACCCAGAGGCTATTGCAGCCATCCAGAGCAAGGCCCTGTTTAGC
AAGGCTGAGGAGCAGCTGCTGAGCAAAGTGGGATCGACCAGCCAGCCCACCTTGGAGACCTTCCAGGACC
TGCTGCACAGACACCCTGATGCCTTCTACCTGGCCCGTACCGCGAAGGCCCTGCAGGCCCACTGGCAGCT
CATGAAGCAGTATTACCTGCTGGAGGACCAGACAGTGCAGCCGCTGCCCAAAGGGGACCAAGTGCTGAAC
TTCTCTGATGCAGAGGACCTGATTGATGACAGTAAGCTCAAGGACATGCGAGATGAGGTCCTGGAACATG
AGCTGATGGTGGCTGACCGGCGCCAGAAGCGAGAGATTCGGCAGCTGGAACAGGAACTGCATAAGTGGCA
GGTGCTAGTGGACAGCATCACAGGCATGAGCTCTCCGGACTTCGACAACCAGACACTGGCAGTGCTGCGG
GGCCGCATGGTGCGGTACCTGATGCGCTCGCGTGAGATCACCCTGGGCAGAGCAACCAAGGATAACCAGA
TTGATGTGGACCTGTCTCTGGAGGGTCCGGCCTGGAAGATATCCCGGAAACAAGGTGTCATCAAGCTGAA
GAACAACGGTGATTTCTTCATTGCCAATGAGGGTCGACGGCCCATCTACATCGATGGACGGCCGGTGCTC
TGTGGCTCCAAATGGCGCCTCAGCAACAACTCTGTGGTGGAGATCGCCAGCCTGCGATTCGTCTTCCTTA
TCAACCAGGACCTCATTGCCCTCATCAGGGCTGAGGCTGCCAAGATCACACCACAGTGA

Translation (462 aa):
MDKDSQGLLDSSLMASGTASRSEDEESLAGQKRASSQALGTIPKRRSSSRFIKRKKFDDELVESSLAKSS
TRAKGASGVEPGRCSGSEPSSSEKKKVSKAPSTPVPPSPAPAPGLTKRVKKSKQPLQVTKDLGRWKPADD
LLLINAVLQTNDLTSVHLGVKFSCRFTLREVQERWYALLYDPVISKLACQAMRQLHPEAIAAIQSKALFS
KAEEQLLSKVGSTSQPTLETFQDLLHRHPDAFYLARTAKALQAHWQLMKQYYLLEDQTVQPLPKGDQVLN
FSDAEDLIDDSKLKDMRDEVLEHELMVADRRQKREIRQLEQELHKWQVLVDSITGMSSPDFDNQTLAVLR
GRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVL
CGSKWRLSNNSVVEIASLRFVFLINQDLIALIRAEAAKITPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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