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Report for CCDS86598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86598.1 Public Homo sapiens 17 C17orf113 24 110 108 CCDS HistoryNCBI Gene:110806298Re-query CCDS DB by CCDS ID:86598.1Re-query CCDS DB by GeneID:110806298See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 86598.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587304.3 ENSP00000490245.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000587304.3Link to Ensembl Protein Viewer:ENSP00000490245.1Re-query CCDS DB by Nucleotide ID:ENST00000587304Re-query CCDS DB by Protein ID:ENSP00000490245
Original member Current member NCBI NM_001358661.2 NP_001345590.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001358661.2Link to Protein Sequence:NP_001345590.1Re-query CCDS DB by Nucleotide ID:NM_001358661Re-query CCDS DB by Protein ID:NP_001345590Link to BLAST:NP_001345590.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001345590.1 675 A0A1B0GUU1 675 100% 0 0

Chromosomal Locations for CCDS 86598.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 42039705 42041189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42042834 42043376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2028 nt):
ATGGTGCCCCCAGGGAAGAAACCAGCGGGAGAGGCCTCCAACTCCAACAAGAAGTGTAAGCGTTACTTCA
ACGAGCACTGGAAAGAGGAGTTTACCTGGCTGGACTTTGACTATGAGCGGAAGCTGATGTTCTGCCTCGA
GTGCCGCCAGGCCCTGGTACGGAACAAGCATGGCAAAGCCGAAAACGCCTTCACTGTGGGCACAGACAAC
TTCCAGCGCCACGCCCTGCTGCGCCACGTGACCTCAGGAGCCCACCGCCAGGCTCTGGCTGTCAACCAGG
GCCAGCCCCCTTTTGAGGGCCAGGCTGAAGGTGGAGGGGCCTGCCCAGGCCTGGCTACGACCCCTGCCTC
CAGGGGCGTCAAGGTGGAGTTAGACCCGGCCAAAGTGGCTGTGCTGACTACTGTGTACTGCATGGCAAAG
GAGGATGTGCCCAATGACCGCTGCTCTGCCCTGCTCGAGCTGCAGAGGTTCAACCTGTGCCAGGCACTGC
TGGGCACAGAGCATGGCGATTACTACAGTCCCAGGAGGGTGAGGGACATGCAGGTGGCCATTGCCAGTGT
CTTGCACACAGAGGCCTGCCAGCGCCTGAAGGCATCCCCATATGTGGGGCTGGTGTTGGACGAGACCAGA
GACTGGCCGGAGTCACACAGCCTGGCCCTGTTTGCCACTTCAGTGTCCCCCTGTGATGGCCAGCCCGCCA
CCACCTTCCTGGGCAGTGTGGAGCTACAGGAGGGCGAGGCCACTGCTGGCCAGCTCTTGGACATCCTGCA
GGCTTTCGGCGTATCTGCACCCAAGCTGGCCTGGCTCAGCTCAAGCCTCCCCAGTGAGCGCCTGGGGAGT
GTGGGCCCACAGCTCCGGGCCACTTGCCCACTGCTGGCAGAGCTGCATTGTCTCCCTGGCCGGACAGATC
CTGAGCCCCCGGCCTACTTGGGTCAATATGAGAGCATATTGGATGCCCTATTCCGCCTCCATGGTGGCCC
TAGTTCCCACTTGGTCCCTGAGCTCCGGGCAGCACTGGACCTTGCAGCTATTGACTTGGCAGGGCCTCGG
CCAGTGCCCTGGGCCTCCCTGCTGCCTGTAGTGGAAGCAGTGGCCGAGGCCTGGCCTGGCCTGGTGCCCA
CCCTGGAGGCTGCAGCCCTTGCCTCACCTGTGGCGGGGTCACTGGCCCTGGCCCTGCGCCAGTTCACCTT
CGTGGCCTTCACCCACCTGCTGCTGGATGCCCTGCCCTCTGTGCAGAAGCTCTCCCTTGTCCTGCAGGCA
GAAGAGCCGGACTTGGCCTTGCTGCAGCCTCTGGTGATGGCGGCTGCGGCCTCCCTCCAAGCTCAGCGCG
GCTCAGGTGGGGCCCGCCTCCAGGGCTTCCTGCAGGAACTGGCATCCATGGACCCTGACGCCAGCAGCGG
ACGCTGCACCTACCGCGGCGTGGAGCTGCTCGGTTACTCCGAGGCTGCGGTCCGGGGCTTGGAGTGGCTC
CGGGGATCCTTCCTGGACTCCATGCGGAAGGGCCTACAGGACTCCTACCCCGGGCCTTCGCTGGACGCCG
TGGCCGCCTTCGCAGCGATCTTCGACCCCCGACGCTACCCGCAGGCGCCGGAGGAGCTGGGCACGCATGG
CGAGGGGGCGCTGCGGGTGCTGCTGCGCGGCTTTGCTCCTGCCGTGGTGCGCCAGCGGGCGCTGGGCGAC
TTCGCGCTGTTTAAGCGCGTAGTATTCGGCCTTGGGCGGCTCGGCCCGCGGGCCCTGTGCACCCAGCTGG
CGTGCGCGCACTCGGAGCTGCACGAGCTCTTCCCCGACTTCGCCGCCCTAGCCGCCTTGGCTTTGGCGCT
GCCCGCGGGCGCTGGCCTGCTGGACAAGGTCGGCCGCAGCCGGGAGCTGCGGTGGTGGGGGCAGAGTGGG
GCCGGGGAAGGCCGGGGGGGCCACATGGTGAAGATCGCAGTGGATGGGCCCCCGCTGCACGAGTTTGACT
TCGGGTTGGCTGTGGAGTTCTTAGAGAGTGGGTGGGGAGAGGGCTTCCTGGGGTCGCAGCTCACCTGA

Translation (675 aa):
MVPPGKKPAGEASNSNKKCKRYFNEHWKEEFTWLDFDYERKLMFCLECRQALVRNKHGKAENAFTVGTDN
FQRHALLRHVTSGAHRQALAVNQGQPPFEGQAEGGGACPGLATTPASRGVKVELDPAKVAVLTTVYCMAK
EDVPNDRCSALLELQRFNLCQALLGTEHGDYYSPRRVRDMQVAIASVLHTEACQRLKASPYVGLVLDETR
DWPESHSLALFATSVSPCDGQPATTFLGSVELQEGEATAGQLLDILQAFGVSAPKLAWLSSSLPSERLGS
VGPQLRATCPLLAELHCLPGRTDPEPPAYLGQYESILDALFRLHGGPSSHLVPELRAALDLAAIDLAGPR
PVPWASLLPVVEAVAEAWPGLVPTLEAAALASPVAGSLALALRQFTFVAFTHLLLDALPSVQKLSLVLQA
EEPDLALLQPLVMAAAASLQAQRGSGGARLQGFLQELASMDPDASSGRCTYRGVELLGYSEAAVRGLEWL
RGSFLDSMRKGLQDSYPGPSLDAVAAFAAIFDPRRYPQAPEELGTHGEGALRVLLRGFAPAVVRQRALGD
FALFKRVVFGLGRLGPRALCTQLACAHSELHELFPDFAALAALALALPAGAGLLDKVGRSRELRWWGQSG
AGEGRGGHMVKIAVDGPPLHEFDFGLAVEFLESGWGEGFLGSQLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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