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Report for CCDS8357.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8357.3 Public Homo sapiens 11 TIMM8B 24 110 108 CCDS HistoryNCBI Gene:26521Re-query CCDS DB by CCDS ID:8357.3Re-query CCDS DB by GeneID:26521See the combined annotation on chromosome 11 in Sequence Viewer

Public Note for CCDS 8357.2
The coding region has been updated to start at a downstream in-frame start codon that is supported by conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 8357.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000504148.3 ENSP00000422122.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000504148.3Link to Ensembl Protein Viewer:ENSP00000422122.2Re-query CCDS DB by Nucleotide ID:ENST00000504148Re-query CCDS DB by Protein ID:ENSP00000422122
Original member Current member NCBI NM_012459.4 NP_036591.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012459.4Link to Protein Sequence:NP_036591.3Re-query CCDS DB by Nucleotide ID:NM_012459Re-query CCDS DB by Protein ID:NP_036591Link to BLAST:NP_036591.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036591.3 83 Q9Y5J9 83 100% 0 0

Chromosomal Locations for CCDS 8357.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 112085295 112085462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112086640 112086723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (252 nt):
ATGGCGGAGCTGGGCGAAGCCGATGAAGCGGAGTTGCAGCGCCTGGTGGCCGCCGAGCAGCAGAAGGCGC
AGTTTACTGCACAGGTGCATCACTTCATGGAGTTATGTTGGGATAAATGTGTGGAGAAGCCAGGGAATCG
CCTAGACTCTCGCACTGAAAATTGTCTCTCCAGCTGTGTAGACCGCTTCATTGACACCACTCTTGCCATC
ACCAGTCGGTTTGCCCAGATTGTACAGAAAGGAGGGCAGTAG

Translation (83 aa):
MAELGEADEAELQRLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGNRLDSRTENCLSSCVDRFIDTTLAI
TSRFAQIVQKGGQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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