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Report for CCDS83477.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83477.1 Public Homo sapiens X ARHGEF9 24 110 108 CCDS HistoryNCBI Gene:23229Re-query CCDS DB by CCDS ID:83477.1Re-query CCDS DB by GeneID:23229See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83477.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374872.4 ENSP00000364006.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374872.4Link to Ensembl Protein Viewer:ENSP00000364006.1Re-query CCDS DB by Nucleotide ID:ENST00000374872Re-query CCDS DB by Protein ID:ENSP00000364006
Original member Current member EBI ENST00000624210.3 ENSP00000485144.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000624210.3Link to Ensembl Protein Viewer:ENSP00000485144.1Re-query CCDS DB by Nucleotide ID:ENST00000624210Re-query CCDS DB by Protein ID:ENSP00000485144
Original member Current member EBI ENST00000624538.2 ENSP00000485282.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000624538.2Link to Ensembl Protein Viewer:ENSP00000485282.2Re-query CCDS DB by Nucleotide ID:ENST00000624538Re-query CCDS DB by Protein ID:ENSP00000485282
Original member Current member EBI ENST00000637723.2 ENSP00000489637.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000637723.2Link to Ensembl Protein Viewer:ENSP00000489637.2Re-query CCDS DB by Nucleotide ID:ENST00000637723Re-query CCDS DB by Protein ID:ENSP00000489637
Original member Current member EBI ENST00000636392.1 ENSP00000489853.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000636392.1Link to Ensembl Protein Viewer:ENSP00000489853.1Re-query CCDS DB by Nucleotide ID:ENST00000636392Re-query CCDS DB by Protein ID:ENSP00000489853
Original member Current member EBI ENST00000637178.1 ENSP00000489862.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000637178.1Link to Ensembl Protein Viewer:ENSP00000489862.1Re-query CCDS DB by Nucleotide ID:ENST00000637178Re-query CCDS DB by Protein ID:ENSP00000489862
Original member Current member EBI ENST00000636048.1 ENSP00000490063.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000636048.1Link to Ensembl Protein Viewer:ENSP00000490063.1Re-query CCDS DB by Nucleotide ID:ENST00000636048Re-query CCDS DB by Protein ID:ENSP00000490063
Original member Current member EBI ENST00000637520.1 ENSP00000490123.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000637520.1Link to Ensembl Protein Viewer:ENSP00000490123.1Re-query CCDS DB by Nucleotide ID:ENST00000637520Re-query CCDS DB by Protein ID:ENSP00000490123
Original member Current member EBI ENST00000637417.1 ENSP00000490269.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000637417.1Link to Ensembl Protein Viewer:ENSP00000490269.1Re-query CCDS DB by Nucleotide ID:ENST00000637417Re-query CCDS DB by Protein ID:ENSP00000490269
Original member Current member EBI ENST00000637557.1 ENSP00000490679.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000637557.1Link to Ensembl Protein Viewer:ENSP00000490679.1Re-query CCDS DB by Nucleotide ID:ENST00000637557Re-query CCDS DB by Protein ID:ENSP00000490679
Original member Current member EBI ENST00000635967.1 ENSP00000490691.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000635967.1Link to Ensembl Protein Viewer:ENSP00000490691.1Re-query CCDS DB by Nucleotide ID:ENST00000635967Re-query CCDS DB by Protein ID:ENSP00000490691
Original member Current member NCBI NM_001330495.2 NP_001317424.1 Accepted alive Link to Nucleotide Sequence:NM_001330495.2Link to Protein Sequence:NP_001317424.1Re-query CCDS DB by Nucleotide ID:NM_001330495Re-query CCDS DB by Protein ID:NP_001317424Link to BLAST:NP_001317424.1
Original member Current member NCBI NM_001369033.1 NP_001355962.1 Accepted alive Link to Nucleotide Sequence:NM_001369033.1Link to Protein Sequence:NP_001355962.1Re-query CCDS DB by Nucleotide ID:NM_001369033Re-query CCDS DB by Protein ID:NP_001355962Link to BLAST:NP_001355962.1
Original member Current member NCBI NM_001369034.1 NP_001355963.1 Accepted alive Link to Nucleotide Sequence:NM_001369034.1Link to Protein Sequence:NP_001355963.1Re-query CCDS DB by Nucleotide ID:NM_001369034Re-query CCDS DB by Protein ID:NP_001355963Link to BLAST:NP_001355963.1
Original member Current member NCBI NM_001369035.1 NP_001355964.1 Accepted alive Link to Nucleotide Sequence:NM_001369035.1Link to Protein Sequence:NP_001355964.1Re-query CCDS DB by Nucleotide ID:NM_001369035Re-query CCDS DB by Protein ID:NP_001355964Link to BLAST:NP_001355964.1
Original member Current member NCBI NM_001369036.1 NP_001355965.1 Accepted alive Link to Nucleotide Sequence:NM_001369036.1Link to Protein Sequence:NP_001355965.1Re-query CCDS DB by Nucleotide ID:NM_001369036Re-query CCDS DB by Protein ID:NP_001355965Link to BLAST:NP_001355965.1
Original member Current member NCBI NM_001369037.1 NP_001355966.1 Accepted alive Link to Nucleotide Sequence:NM_001369037.1Link to Protein Sequence:NP_001355966.1Re-query CCDS DB by Nucleotide ID:NM_001369037Re-query CCDS DB by Protein ID:NP_001355966Link to BLAST:NP_001355966.1
Original member Current member NCBI NM_001369038.1 NP_001355967.1 Accepted alive Link to Nucleotide Sequence:NM_001369038.1Link to Protein Sequence:NP_001355967.1Re-query CCDS DB by Nucleotide ID:NM_001369038Re-query CCDS DB by Protein ID:NP_001355967Link to BLAST:NP_001355967.1

Chromosomal Locations for CCDS 83477.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 63638028 63638209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 63643980 63644048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 63655494 63655737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 63665886 63666017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 63674038 63674167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 63678340 63678572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 63697125 63697304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 63706258 63706449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 63724532 63724657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGGCCAACCGGGAGTTGGCATTTAAAGCTGGCGACGTCATCAAAGTCTTGGATGCTTCCAACAAGGATT
GGTGGTGGGGCCAGATCGACGATGAGGAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCA
GGAGGATGAGGTGGAGGAGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTC
TGTCTGGGGCGGCCACTACAGAACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGCACTG
AGCGTCACTACATCAAGCACCTCAAGGATATTTGTGAGGGCTATCTGAAGCAGTGCCGGAAGAGAAGGGA
CATGTTCAGTGACGAGCAACTGAAGGTAATCTTTGGGAACATTGAAGATATCTACAGATTTCAGATGGGC
TTTGTGAGAGACCTGGAGAAACAGTATAACAATGATGACCCCCACCTCAGCGAGATAGGACCCTGCTTCC
TAGAGCACCAAGATGGATTCTGGATATACTCTGAGTATTGTAACAACCACCTGGATGCTTGCATGGAGCT
CTCCAAACTGATGAAGGACAGCCGCTACCAGCACTTCTTTGAGGCCTGTCGCCTCTTGCAGCAGATGATT
GACATTGCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATCTGCAAGTATCCCTTACAGTTGGCTG
AGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGCAGCTGCTTTGGCTGTCATGAG
AAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAATATTGACAAGATTGCTCAGTGGCAG
GCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTAGACAGGAGCTCGGAGCTGATCTACACTGGGGAGA
TGGCCTGGATCTACCAGCCCTACGGCCGCAACCAGCAGCGGGTCTTCTTCCTGTTTGACCACCAGATGGT
CCTCTGCAAGAAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATAT
GAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTC
ACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAG
GGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAG
AAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTC
CTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCA
GTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTA
ACCCCCTTCAAAAAATGA

Translation (495 aa):
MANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVNQEDEVEEGPSDVQNGHLDPNSDCL
CLGRPLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLKQCRKRRDMFSDEQLKVIFGNIEDIYRFQMG
FVRDLEKQYNNDDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKDSRYQHFFEACRLLQQMI
DIAIDGFLLTPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQ
ASVLDWEGEDILDRSSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKY
EVVDIEDGRDDDFNVSMKNAFKLHNKETEEIHLFFAKKLEEKIRWLRAFREERKMVQEDEKIGFEISENQ
KRQAAMTVRKVPKQKGVNSARSVPPSYPPPQDPLNHGQYLVPDGIAQSQVFEFTEPKRSQSPFWQNFSRL
TPFKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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