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Report for CCDS82433.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82433.1 Public Homo sapiens 2 NRBP1 24 110 108 CCDS HistoryNCBI Gene:29959Re-query CCDS DB by CCDS ID:82433.1Re-query CCDS DB by GeneID:29959See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82433.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379863.7 ENSP00000369192.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000379863.7Link to Ensembl Protein Viewer:ENSP00000369192.3Re-query CCDS DB by Nucleotide ID:ENST00000379863Re-query CCDS DB by Protein ID:ENSP00000369192
Original member Current member NCBI NM_001321358.2 NP_001308287.1 Accepted alive Link to Nucleotide Sequence:NM_001321358.2Link to Protein Sequence:NP_001308287.1Re-query CCDS DB by Nucleotide ID:NM_001321358Re-query CCDS DB by Protein ID:NP_001308287Link to BLAST:NP_001308287.1
Original member Current member NCBI NM_001321359.2 NP_001308288.1 Accepted alive Link to Nucleotide Sequence:NM_001321359.2Link to Protein Sequence:NP_001308288.1Re-query CCDS DB by Nucleotide ID:NM_001321359Re-query CCDS DB by Protein ID:NP_001308288Link to BLAST:NP_001308288.1

Chromosomal Locations for CCDS 82433.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 27433274 27433483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27433673 27433795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27433989 27434090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27434471 27434560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27434722 27434762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27435133 27435227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27435723 27435746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27436753 27436836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27437047 27437105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27437262 27437360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27439766 27439898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27440403 27440508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27440652 27440702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27440805 27440940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27441127 27441180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27441267 27441330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27441567 27441622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27441708 27441812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1632 nt):
ATGTCGGAGGGGGAGTCCCAGACAGTACTTAGCAGTGGCTCAGACCCAAAGGTAGAATCCTCATCTTCAG
CTCCTGGCCTGACATCAGTGTCACCTCCTGTGACCTCCACAACCTCAGCTGCTTCCCCAGAGGAAGAAGA
AGAAAGTGAAGATGAGTCTGAGATTTTGGAAGAGTCGCCCTGTGGGCGCTGGCAGAAGAGGCGAGAAGAG
GTGAATCAACGGAATGTACCAGGTATTGACAGTGCATACCTGGCCATGGATACAGAGGAAGGTGTAGAGG
TTGTGTGGAATGAGGTACAGTTCTCTGAACGCAAGAACTACAAGCTGCAGGAGGAAAAGGTTCGTGCTGT
GTTTGATAATCTGATTCAATTGGAGCATCTTAACATTGTTAAGTTTCACAAATATTGGGCTGACATTAAA
GAGAACAAGGCCAGGGTCATTTTTATCACAGAATACATGTCATCTGGGAGTCTGAAGCAATTTCTGAAGA
AGACCAAAAAGAACCACAAGACGATGAATGAAAAGGCATGGAAGCGTTGGTGCACACAAATCCTCTCTGC
CCTAAGCTACCTGCACTCCTGTGACCCCCCCATCATCCATGGGAACCTGACCTGTGACACCATCTTCATC
CAGCACAACGGACTCATCAAGATTGGCTCTGTCTTTCATAGGATTTTTGCTAATGTGGCTCCTGACACTA
TCAACAATCATGTGAAGACTTGTCGAGAAGAGCAGAAGAATCTACACTTCTTTGCACCAGAGTATGGAGA
AGTCACTAATGTGACAACAGCAGTGGACATCTACTCCTTTGGCATGTGTGCACTGGAGATGGCAGTGCTG
GAGATTCAGGGCAATGGAGAGTCCTCATATGTGCCACAGGAAGCCATCAGCAGTGCCATCCAGCTTCTAG
AAGACCCATTACAGAGGGAGTTCATTCAAAAGTGCCTGCAGTCTGAGCCTGCTCGCAGACCAACAGCCAG
AGAACTTCTGTTCCACCCAGCATTGTTTGAAGTGCCCTCGCTCAAACTCCTTGCGGCCCACTGCATTGTG
GGACACCAACACATGATCCCAGAGAACGCTCTAGAGGAGATCACCAAAAACATGGATACTAGTGCCGTAC
TGGCTGAAATCCCTGCAGGACCAGGAAGAGAACCAGTTCAGACTTTGTACTCTCAGTCACCAGCTCTGGA
ATTAGATAAATTCCTTGAAGATGTCAGGAATGGGATCTATCCTCTGACAGCCTTTGGGCTGCCTCGGCCC
CAGCAGCCACAGCAGGAGGAGGTGACATCACCTGTCGTGCCCCCCTCTGTCAAGACTCCGACACCTGAAC
CAGCTGAGGTGGAGACTCGCAAGGTGGTGCTGATGCAGTGCAACATTGAGTCGGTGGAGGAGGGAGTCAA
ACACCACCTGACACTTCTGCTGAAGTTGGAGGACAAACTGAACCGGCACCTGAGCTGTGACCTGATGCCA
AATGAGAATATCCCCGAGTTGGCGGCTGAGCTGGTGCAGCTGGGCTTCATTAGTGAGGCTGACCAGAGCC
GGTTGACTTCTCTGCTAGAAGAGACCTTGAACAAGTTCAATTTTGCCAGGAACAGTACCCTCAACTCAGC
CGCTGTCACCGTCTCCTCTTAG

Translation (543 aa):
MSEGESQTVLSSGSDPKVESSSSAPGLTSVSPPVTSTTSAASPEEEEESEDESEILEESPCGRWQKRREE
VNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLIQLEHLNIVKFHKYWADIK
ENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRWCTQILSALSYLHSCDPPIIHGNLTCDTIFI
QHNGLIKIGSVFHRIFANVAPDTINNHVKTCREEQKNLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVL
EIQGNGESSYVPQEAISSAIQLLEDPLQREFIQKCLQSEPARRPTARELLFHPALFEVPSLKLLAAHCIV
GHQHMIPENALEEITKNMDTSAVLAEIPAGPGREPVQTLYSQSPALELDKFLEDVRNGIYPLTAFGLPRP
QQPQQEEVTSPVVPPSVKTPTPEPAEVETRKVVLMQCNIESVEEGVKHHLTLLLKLEDKLNRHLSCDLMP
NENIPELAAELVQLGFISEADQSRLTSLLEETLNKFNFARNSTLNSAAVTVSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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