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Report for CCDS7641.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7641.1 Public Homo sapiens 10 FAM53B 24 110 108 CCDS HistoryNCBI Gene:9679Re-query CCDS DB by CCDS ID:7641.1Re-query CCDS DB by GeneID:9679See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7641.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337318.8 ENSP00000338532.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337318.8Link to Ensembl Protein Viewer:ENSP00000338532.3Re-query CCDS DB by Nucleotide ID:ENST00000337318Re-query CCDS DB by Protein ID:ENSP00000338532
Original member Current member EBI ENST00000392754.7 ENSP00000376509.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392754.7Link to Ensembl Protein Viewer:ENSP00000376509.3Re-query CCDS DB by Nucleotide ID:ENST00000392754Re-query CCDS DB by Protein ID:ENSP00000376509
Original member Current member NCBI NM_014661.4 NP_055476.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014661.4Link to Protein Sequence:NP_055476.3Re-query CCDS DB by Nucleotide ID:NM_014661Re-query CCDS DB by Protein ID:NP_055476Link to BLAST:NP_055476.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055476.3 422 Q14153-1 422 100% 0 0

Chromosomal Locations for CCDS 7641.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 124623242 124623604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124681607 124682379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124696158 124696212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124706636 124706713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGGTGATGGTCCTAAGTGAAAGCCTCAGCACCCGGGGAGCTGACTCCATTGCATGTGGGACCTTCAGCC
GTGAACTGCACACGCCAAAGAAGATGAGTCAAGGACCTACACTTTTCTCTTGTGGAATTATGGAAAATGA
CAGATGGCGAGACCTGGACAGGAAATGCCCTCTTCAGATTGACCAACCGAGCACCAGCATCTGGGAATGC
CTGCCTGAAAAGGACAGCTCACTATGGCACCGGGAGGCAGTGACCGCCTGCGCTGTGACCAGTCTGATCA
AAGACCTCAGCATCAGCGACCACAACGGGAACCCCTCAGCACCCCCTAGCAAGCGCCAGTGCCGCTCACT
GTCCTTCTCCGATGAGATGTCCAGTTGCCGGACATCATGGAGGCCCTTGGGCTCCAAAGTCTGGACTCCC
GTGGAAAAGAGACGCTGCTACAGCGGGGGCAGCGTCCAGCGCTATTCCAACGGCTTCAGCACCATGCAGA
GGAGTTCCAGCTTCAGCCTCCCTTCCCGGGCCAACGTGCTCTCCTCACCCTGCGACCAGGCAGGACTCCA
CCACCGATTTGGAGGGCAGCCCTGCCAAGGGGTGCCAGGCTCAGCCCCGTGTGGACAGGCAGGTGACACC
TGGAGCCCTGACCTGCACCCCGTGGGAGGAGGCCGGCTGGACCTGCAGCGGTCCCTCTCTTGCTCACATG
AGCAGTTTTCCTTTGTGGAATACTGTCCTCCCTCAGCCAACAGCACACCTGCCTCAACACCAGAGCTGGC
GAGACGCTCCAGCGGCCTTTCCCGCAGCCGCTCCCAGCCGTGTGTCCTTAACGACAAGAAGGTCGGTGTT
AAAAGGCGGCGCCCTGAAGAAGTGCAAGAGCAGAGGCCTTCTCTAGACCTTGCCAAGATGGCACAGAACT
GTCAGACCTTCAGCAGCCTCAGCTGCCTGAGCGCAGGGACAGAGGACTGCGGTCCCCAGAGCCCCTTCGC
CCGCCACGTCAGCAACACCAGGGCCTGGACCGCCCTGCTCTCAGCCTCCGGCCCAGGGGGCAGGACCCCC
GCTGGGACCCCGGTCCCTGAGCCTCTTCCCCCTTCCTTCGACGACCACCTCGCCTGCCAGGAGGACCTGT
CCTGTGAGGAGTCAGACAGCTGCGCCCTGGACGAGGATTGTGGCAGGAGAGCGGAGCCGGCTGCAGCCTG
GCGGGACCGCGGGGCCCCTGGGAACAGCCTCTGCTCCCTGGACGGCGAGTTGGACATTGAGCAGATAGAG
AAGAACTGA

Translation (422 aa):
MVMVLSESLSTRGADSIACGTFSRELHTPKKMSQGPTLFSCGIMENDRWRDLDRKCPLQIDQPSTSIWEC
LPEKDSSLWHREAVTACAVTSLIKDLSISDHNGNPSAPPSKRQCRSLSFSDEMSSCRTSWRPLGSKVWTP
VEKRRCYSGGSVQRYSNGFSTMQRSSSFSLPSRANVLSSPCDQAGLHHRFGGQPCQGVPGSAPCGQAGDT
WSPDLHPVGGGRLDLQRSLSCSHEQFSFVEYCPPSANSTPASTPELARRSSGLSRSRSQPCVLNDKKVGV
KRRRPEEVQEQRPSLDLAKMAQNCQTFSSLSCLSAGTEDCGPQSPFARHVSNTRAWTALLSASGPGGRTP
AGTPVPEPLPPSFDDHLACQEDLSCEESDSCALDEDCGRRAEPAAAWRDRGAPGNSLCSLDGELDIEQIE
KN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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