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Report for CCDS74772.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74772.1 Public Homo sapiens 21 TPTE 24 110 108 CCDS HistoryNCBI Gene:7179Re-query CCDS DB by CCDS ID:74772.1Re-query CCDS DB by GeneID:7179See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74772.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000622113.4 ENSP00000482040.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622113.4Link to Ensembl Protein Viewer:ENSP00000482040.1Re-query CCDS DB by Nucleotide ID:ENST00000622113Re-query CCDS DB by Protein ID:ENSP00000482040
Original member Current member NCBI NM_199259.4 NP_954868.2 Accepted alive Link to Nucleotide Sequence:NM_199259.4Link to Protein Sequence:NP_954868.2Re-query CCDS DB by Nucleotide ID:NM_199259Re-query CCDS DB by Protein ID:NP_954868Link to BLAST:NP_954868.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_954868.2 533 P56180-2 533 100% 0 0

Chromosomal Locations for CCDS 74772.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 10538724 10538734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10541112 10541165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10542395 10542448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10552657 10552716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10559494 10559544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10561030 10561191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10567670 10567789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10569437 10569536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10569683 10569746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10570485 10570549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10577460 10577520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10578337 10578418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10578517 10578605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10590462 10590523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10592293 10592373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10595982 10596087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10598015 10598094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10602058 10602150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10603562 10603632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 10605417 10605552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1602 nt):
ATGAATGAAAGTCCTGATCCGACTGACCTGGCGGGAGTCATCATTGAGCTCGGCCCCAATGACAGTCCAC
AGACAAGTGAATTTAAAGGAGCAACCGAGGAGGCACCTGCGAAAGAAAGTGTGTTAGCACGACTTTCCAA
GTTTGAAGTTGAAGATGCTGAAAATGTTGCTTCATATGACAGCAAGATTAAGAAAATTGTGCATTCAATT
GTATCATCCTTTGCATTTGGACTATTTGGAGTTTTCCTGGTCTTACTGGATGTCACTCTCATCCTTGCCG
ACCTAATTTTCACTGACAGCAAACTTTATATTCCTTTGGAGTATCGTTCTATTTCTCTAGCTATTGCCTT
ATTTTTTCTCATGGATGTTCTTCTTCGAGTATTTGTAGAAAGGAGACAGCAGTATTTTTCTGACTTATTT
AACATTTTAGATACTGCCATTATTGTGATTCTTCTGCTGGTTGATGTCGTTTACATTTTTTTTGACATTA
AGTTGCTTAGGAATATTCCCAGATGGACACATTTACTTCGACTTCTACGACTTATTATTCTGTTAAGAAT
TTTTCATCTGTTTCATCAAAAAAGACAACTTGAAAAGCTGATAAGAAGGCGGGTTTCAGAAAACAAAAGG
CGATACACAAGGGATGGATTTGACCTAGACCTCACTTACGTTACAGAACGTATTATTGCTATGTCATTTC
CATCTTCTGGAAGGCAGTCTTTCTATAGAAATCCAATCAAGGAAGTTGTGCGGTTTCTAGATAAGAAACA
CCGAAACCACTATCGAGTCTACAATCTATGCAGTGAAAGAGCTTACGATCCTAAGCACTTCCATAATAGG
GTCGTTAGAATCATGATTGATGATCATAATGTCCCCACTCTACATCAGATGGTGGTTTTCACCAAGGAAG
TAAATGAGTGGATGGCTCAAGATCTTGAAAACATCGTAGCGATTCACTGTAAAGGAGGCACAGATAGAAC
AGGAACTATGGTTTGTGCCTTCCTTATTGCCTCTGAAATATGTTCAACTGCAAAGGAAAGCCTGTATTAT
TTTGGAGAAAGGCGAACAGATAAAACCCACAGCGAAAAATTTCAGGGAGTAAAAACTCCTTCTCAGAAGA
GATATGTTGCATATTTTGCACAAGTGAAACATCTCTACAACTGGAATCTCCCTCCAAGACGGATACTCTT
TATAAAACACTTCATTATTTATTCGATTCCTCGTTATGTACGTGATCTAAAAATCCAAATAGAAATGGAG
AAAAAGGTTGTCTTTTCCACTATTTCATTAGGAAAATGTTCGGTACTTGATAACATTACAACAGACAAAA
TATTAATTGATGTATTCGACGGTCTACCTCTGTATGATGATGTGAAAGTGCAGTTTTTCTATTCGAATCT
TCCTACATACTATGACAATTGCTCATTTTACTTCTGGTTGCACACATCTTTTATTGAAAATAACAGGCTT
TATCTACCAAAAAATGAATTGGATAATCTACATAAACAAAAAGCACGGAGAATTTATCCATCAGATTTTG
CCGTGGAGATACTTTTTGGCGAGAAAATGACTTCCAGTGATGTTGTAGCTGGATCCGATTAA

Translation (533 aa):
MNESPDPTDLAGVIIELGPNDSPQTSEFKGATEEAPAKESVLARLSKFEVEDAENVASYDSKIKKIVHSI
VSSFAFGLFGVFLVLLDVTLILADLIFTDSKLYIPLEYRSISLAIALFFLMDVLLRVFVERRQQYFSDLF
NILDTAIIVILLLVDVVYIFFDIKLLRNIPRWTHLLRLLRLIILLRIFHLFHQKRQLEKLIRRRVSENKR
RYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIKEVVRFLDKKHRNHYRVYNLCSERAYDPKHFHNR
VVRIMIDDHNVPTLHQMVVFTKEVNEWMAQDLENIVAIHCKGGTDRTGTMVCAFLIASEICSTAKESLYY
FGERRTDKTHSEKFQGVKTPSQKRYVAYFAQVKHLYNWNLPPRRILFIKHFIIYSIPRYVRDLKIQIEME
KKVVFSTISLGKCSVLDNITTDKILIDVFDGLPLYDDVKVQFFYSNLPTYYDNCSFYFWLHTSFIENNRL
YLPKNELDNLHKQKARRIYPSDFAVEILFGEKMTSSDVVAGSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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  UCSC Genome Browser
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