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Report for CCDS7456.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7456.1 Public Homo sapiens 10 FRAT2 24 110 108 CCDS HistoryNCBI Gene:23401Re-query CCDS DB by CCDS ID:7456.1Re-query CCDS DB by GeneID:23401See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7456.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371019.4 ENSP00000360058.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371019.4Link to Ensembl Protein Viewer:ENSP00000360058.2Re-query CCDS DB by Nucleotide ID:ENST00000371019Re-query CCDS DB by Protein ID:ENSP00000360058
Original member Current member NCBI NM_012083.3 NP_036215.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012083.3Link to Protein Sequence:NP_036215.1Re-query CCDS DB by Nucleotide ID:NM_012083Re-query CCDS DB by Protein ID:NP_036215Link to BLAST:NP_036215.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036215.1 233 O75474 233 100% 0 0

Chromosomal Locations for CCDS 7456.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97333871 97334572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (702 nt):
ATGCCGTGCCGGAGGGAGGAGGAAGAGGAAGCCGGCGAGGAGGCGGAGGGGGAGGAAGAGGAGGACGACA
GCTTCCTCCTGCTGCAGCAGTCGGTGACGCTGGGCAGCTCGGGCGAGGTGGACCGGCTGGTGGCCCAGAT
CGGCGAGACGCTGCAGCTGGACGCGGCGCAGGACAGCCCGGCCTCGCCGTGCGCGCCCCCGGGGGTGCCG
CTGCGGGCCCCGGGGCCCCTGGCTGCGGCGGTGCCGGCGGACAAGGCCCGGCCCCCGGCGGTGCCGCTGC
TGCTGCCGCCCGCTTCGGCTGAGACGGTGGGCCCGGCGCCCTCTGGGGCCCTGCGCTGCGCCCTAGGGGA
CCGCGGCCGCGTGCGCGGACGCGCTGCGCCCTACTGCGTGGCGGAGGTCGCCGCAGGCCCCAGCGCGCTG
CCGGGGCCGTGCCGGCGAGGATGGCTCAGGGACGCGGTCACCTCCCGCCGCTTGCAGCAGCGCCGATGGA
CCCAAGCCGGGGCACGCGCCGGCGACGACGACCCGCATCGGCTCCTCCAGCAGCTCGTGCTCTCGGGAAA
CCTCATCAAGGAAGCCGTGCGGAGACTCCAACGAGCCGTCGCCGCGGTTGCAGCCACGGGCCCCGCAAGC
GCCCCTGGGCCCGGGGGAGGCCGCAGCGGACCTGACCGCATTGCCCTGCAGCCCTCAGGCTCCTTGCTCT
GA

Translation (233 aa):
MPCRREEEEEAGEEAEGEEEEDDSFLLLQQSVTLGSSGEVDRLVAQIGETLQLDAAQDSPASPCAPPGVP
LRAPGPLAAAVPADKARPPAVPLLLPPASAETVGPAPSGALRCALGDRGRVRGRAAPYCVAEVAAGPSAL
PGPCRRGWLRDAVTSRRLQQRRWTQAGARAGDDDPHRLLQQLVLSGNLIKEAVRRLQRAVAAVAATGPAS
APGPGGGRSGPDRIALQPSGSLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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