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Report for CCDS73927.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73927.1 Public Homo sapiens 16 SLC22A31 24 110 108 CCDS HistoryNCBI Gene:146429Re-query CCDS DB by CCDS ID:73927.1Re-query CCDS DB by GeneID:146429See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 73927.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000562855.7 ENSP00000474621.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000562855.7Link to Ensembl Protein Viewer:ENSP00000474621.2Re-query CCDS DB by Nucleotide ID:ENST00000562855Re-query CCDS DB by Protein ID:ENSP00000474621
Original member Current member EBI ENST00000614943.4 ENSP00000481421.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614943.4Link to Ensembl Protein Viewer:ENSP00000481421.1Re-query CCDS DB by Nucleotide ID:ENST00000614943Re-query CCDS DB by Protein ID:ENSP00000481421
Original member Current member NCBI NM_001384766.1 NP_001371695.1 Accepted alive Link to Nucleotide Sequence:NM_001384766.1Link to Protein Sequence:NP_001371695.1Re-query CCDS DB by Nucleotide ID:NM_001384766Re-query CCDS DB by Protein ID:NP_001371695Link to BLAST:NP_001371695.1
Original member Current member NCBI NM_001384767.1 NP_001371696.1 Accepted alive Link to Nucleotide Sequence:NM_001384767.1Link to Protein Sequence:NP_001371696.1Re-query CCDS DB by Nucleotide ID:NM_001384767Re-query CCDS DB by Protein ID:NP_001371696Link to BLAST:NP_001371696.1
Original member Current member NCBI NM_001384768.1 NP_001371697.1 Accepted alive Link to Nucleotide Sequence:NM_001384768.1Link to Protein Sequence:NP_001371697.1Re-query CCDS DB by Nucleotide ID:NM_001384768Re-query CCDS DB by Protein ID:NP_001371697Link to BLAST:NP_001371697.1
Original member Current member NCBI NM_001384769.1 NP_001371698.1 Accepted alive Link to Nucleotide Sequence:NM_001384769.1Link to Protein Sequence:NP_001371698.1Re-query CCDS DB by Nucleotide ID:NM_001384769Re-query CCDS DB by Protein ID:NP_001371698Link to BLAST:NP_001371698.1

Chromosomal Locations for CCDS 73927.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 89195999 89196305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89197298 89197409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89198122 89198336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89198442 89198550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89198652 89198797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89199023 89199150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1017 nt):
ATGGGGGCTGGCCTTTTCTCGGTGGTGGGCACCCTGCTGCTGCCCGGCCTGGCTGCGCTTGTGCAGGACT
GGCGTCTTCTGCAGGGGCTGGGTGCCCTGATGAGTGGACTCTTGCTGCTCTTTTGGGGGTTCCCGGCCCT
GTTCCCCGAGTCTCCCTGCTGGCTGCTGGCCACAGGTCAGGTAGCTCGAGCCAGGAAGATCCTGTGGCGC
TTTGCAGAAGCCAGTGGCGTGGGCCCCGGGGACAGTTCCTTGGAGGAGAACTCCCTGGCTACAGAGCTGA
CCATGCTGTCTGCACGGAGCCCCCAGCCCCGGTACCACTCCCCACTGGGGCTTCTGCGTACCCGAGTCAC
CTGGAGAAACGGGCTTATCTTGGGCTTCAGCTCGCTGGTTGGTGGAGGCATCAGAGCTAGCTTCCGCCGC
AGCCTGGCACCTCAGGTGCCGACCTTCTACCTGCCCTACTTCCTGGAGGCCGGCCTGGAGGCGGCAGCCT
TGGTCTTCCTGCTCCTGACGGCAGATTGCTGTGGACGCCGCCCCGTGCTGCTGCTGGGCACCATGGTCAC
AGGCCTGGCATCCCTGCTGCTCCTCGCTGGGGCCCAGTATCTGCCAGGCTGGACTGTGCTGTTCCTCTCT
GTCCTGGGGCTCCTGGCCTCCCGGGCTGTGTCCGCACTCAGCAGCCTCTTCGCGGCCGAGGTCTTCCCCA
CGGTGATCAGGGGGGCCGGGCTGGGCCTGGTGCTGGGGGCCGGGTTCCTGGGCCAGGCAGCCGGCCCCCT
GGACACCCTGCACGGCCGGCAGGGCTTCTTCCTGCAACAAGTCGTCTTCGCCTCCCTTGCTGTCCTTGCC
CTGCTGTGTGTCCTGCTGCTGCCTGAGAGCCGAAGCCGGGGGCTGCCCCAGTCACTGCAGGACGCCGACC
GCCTGCGCCGCTCCCCACTCCTGCGGGGCCGCCCCCGCCAGGACCACCTGCCTCTGCTGCCGCCCTCCAA
CTCCTACTGGGCCGGCCACACCCCCGAGCAGCACTAG

Translation (338 aa):
MGAGLFSVVGTLLLPGLAALVQDWRLLQGLGALMSGLLLLFWGFPALFPESPCWLLATGQVARARKILWR
FAEASGVGPGDSSLEENSLATELTMLSARSPQPRYHSPLGLLRTRVTWRNGLILGFSSLVGGGIRASFRR
SLAPQVPTFYLPYFLEAGLEAAALVFLLLTADCCGRRPVLLLGTMVTGLASLLLLAGAQYLPGWTVLFLS
VLGLLASRAVSALSSLFAAEVFPTVIRGAGLGLVLGAGFLGQAAGPLDTLHGRQGFFLQQVVFASLAVLA
LLCVLLLPESRSRGLPQSLQDADRLRRSPLLRGRPRQDHLPLLPPSNSYWAGHTPEQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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